Serratia nematodiphila: NLX84_08565
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Entry
NLX84_08565 CDS
T08619
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
snem
Serratia nematodiphila
Pathway
snem00541
Biosynthesis of various nucleotide sugars
snem01100
Metabolic pathways
snem01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NLX84_08565 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
NLX84_08565 (kdsB)
Enzymes [BR:
snem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NLX84_08565 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
Lipid A
NLX84_08565 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DacZ_P
DUF2064
Motif
Other DBs
NCBI-ProteinID:
UTO03086
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Position
1818697..1819446
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AA seq
249 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHPEVAKAVEA
AGGEVCMTSPDHHSGTERLAEVIAHYGFADDQIIVNVQGDEPLIPPVIVRQVAENLAGSQ
AGMATLAVPIESAEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAASKESIGDSLLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL
QRVRDSIQP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgctattattcccgcccgctacgcctcaacccgtttgccgggcaaaccg
ctggccgatattcacggcaagccgatggtggtgcatgtgatggagcgcgcccgtgagtcc
ggcgccagccgcgtcatcgtggcgaccgatcatcctgaagtcgccaaagcggtggaagcc
gccggcggcgaagtgtgcatgaccagcccggatcaccattccggcaccgagcgtttggcg
gaagtgatcgcgcactacggctttgccgacgaccagatcatcgttaacgtgcagggcgat
gagccgctgatcccacccgttatcgtgcggcaggtggcggaaaacctggcgggcagccag
gccggcatggcgacgttggcggtgccgatcgagagcgccgaagaggctttcaaccccaac
gcggtgaaggtggtgatggacgcgcagggctacgcgctctatttctcacgcgccaccatt
ccgtgggatcgcgagcgtttcgccgcgtcgaaagagagcatcggcgacagcctgctgcgt
catatcggcatctacgcataccgcgcgggcttcgtgcgccgctacgtcagctgggcgccg
agccaactggagcagatcgagctgttggaacagctgcgcgtgctgtggtacggtgaaaag
atccacgtggcggtcgcgaaagcgatcccgagcgtgggggtcgatacgccggaagacctc
cagcgcgtgcgcgacagcattcaaccctga
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