Serratia nematodiphila: NLX84_08740
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Entry
NLX84_08740 CDS
T08619
Symbol
ompA
Name
(GenBank) porin OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_08740 (ompA)
Transporters [BR:
snem02000
]
Other transporters
Pores ion channels [TC:
1
]
NLX84_08740 (ompA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Phage_T7_tail
Pilus_CpaD
Motif
Other DBs
NCBI-ProteinID:
UTO03117
LinkDB
All DBs
Position
complement(1863767..1864846)
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AA seq
359 aa
AA seq
DB search
MKKTAIALAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFYGNGYQNGIGNGPTHK
DQLGAGAFLGYQANQYLGFELGYDWLGRMPYKGSVNNGAFKAQGVQLAAKLSYPIADDLD
IYTRLGGMVWRADSKANYGRTGQRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFVSNI
GDAGTVGARPDNTMLSLGVSYRFGQDDVVAPAPAPAPAPVVETKRFTLKSDVLFNFNKST
LKAEGQQALDQLYTQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSEQRAQSVVDYLVSKG
IPSDKISARGMGEADAVTGNTCGYKSGRATKAQIACLAPDRRVEIEVKGIKDVVTQPQG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcattagcagtggcactggcaggtttcgctaccgtagcgcaa
gccgctccaaaagataacacctggtacaccggtgctaaactgggctggtcccagtaccat
gacactggtttctacggcaacggttaccagaacggtatcggcaacggcccaacccataaa
gatcagctgggtgccggcgcgttcctgggctaccaggcaaaccaatacctgggcttcgag
ctgggctatgactggctcggccgcatgccttacaaaggcagcgtgaacaacggtgctttc
aaagcgcagggcgttcaactggccgctaaactgagctacccaattgctgacgatctggac
atctacactcgtctgggtggtatggtatggcgtgcagactccaaagctaactacggccgt
actggtcagcgtctgagcgaccacgacaccggcgtttctccgctggctgctgttggtgtt
gaatacgcactgaccaaaaactgggctactcgcctggattaccagttcgtaagcaacatc
ggtgacgcaggtaccgttggcgcacgtccagacaacaccatgctgagcctgggcgtttct
taccgcttcggccaggatgacgtagttgctccagcaccagctccggctccagctccagtt
gttgaaaccaagcgtttcactctgaagtctgacgtgctgttcaacttcaacaaatctact
ctgaaagcagaaggccagcaggctctggatcagctgtacacccagctgagctccatggat
cctaaagacggctccgtagttgttctgggttacaccgacgcagttggttctgaccagtac
aaccagaaactgtctgaacaacgcgcacagagcgttgttgactacctggtctccaaaggc
atcccgtcagacaaaatctctgcacgtggtatgggtgaagcagatgcagttacaggcaac
acctgtggctacaaatctggccgcgctaccaaagctcagatcgcttgcctggcaccagat
cgtcgcgtagagatcgaagttaaaggtatcaaagacgttgtaactcagcctcagggctaa
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