Serratia nematodiphila: NLX84_10160
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Entry
NLX84_10160 CDS
T08619
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
snem
Serratia nematodiphila
Pathway
snem00541
Biosynthesis of various nucleotide sugars
snem01100
Metabolic pathways
snem01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NLX84_10160 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
NLX84_10160 (kdsA)
Enzymes [BR:
snem01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NLX84_10160 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
snem01005
]
Lipid A
NLX84_10160 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
UTO03373
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Position
2120319..2121173
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AA seq
284 aa
AA seq
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MKQKVVSIGDIDVANDLPFVLFGGMNVLESRDLAMSICEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLEEGMKIFEELKKTFGVKIITDVHEAAQAQPVSEVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFLEA
HPDPNNAKCDGPSALPLDKLEPFLAQMKAIDDLVKSFPELDTSN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaaagtggttagcattggcgacatcgacgtagcaaacgatctgccgtttgtg
ctgtttggcggtatgaatgtgctggaatcgcgcgacctggcgatgagcatctgcgagcac
tacgtcaccgtgacgcaaaaactgggcattccttacgtattcaaagcctctttcgacaag
gccaaccgttcttccattcactcgtaccgcggtccgggcctggaagaagggatgaagatc
ttcgaagagctgaaaaaaaccttcggcgtgaaaatcatcaccgacgtgcacgaagcggca
caggcgcagccggtttctgaagtggttgacgtgatccagctgccggccttcctggcgcgt
cagaccgatctggtggaagcgatggcgaaaaccggcgcggtgatcaacgtcaagaagccg
cagtttgtcagcccggggcagatgggcaacatcgtcgacaagttcaaagagggcggcaac
gaccaggtgatcctgtgcgatcgcggcagcaactttggctatgacaacctggtggtcgac
atgctgggcatcaacgtgatgaagaacgtgactggcggccatccggtgatcttcgacgtg
acccacgcgctgcagacccgcgatccgttcggcgccgcgtccggcggccgtcgtgctcag
gtggccgagctggcgcgtgccggcatggcggttggcctggcagggctgttcctcgaagcg
cacccggatcctaacaacgccaagtgcgacgggccgtccgcgctgccgttggacaagctg
gaaccgttcctggcgcagatgaaagccatcgacgacctggtgaagagcttcccggagctg
gataccagcaactaa
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