Serratia nematodiphila: NLX84_10360
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Entry
NLX84_10360 CDS
T08619
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
snem
Serratia nematodiphila
Pathway
snem00020
Citrate cycle (TCA cycle)
snem00480
Glutathione metabolism
snem00720
Other carbon fixation pathways
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01120
Microbial metabolism in diverse environments
snem01200
Carbon metabolism
snem01210
2-Oxocarboxylic acid metabolism
snem01230
Biosynthesis of amino acids
snem04146
Peroxisome
Module
snem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snem_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NLX84_10360 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
NLX84_10360 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NLX84_10360 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NLX84_10360 (icd)
Enzymes [BR:
snem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
NLX84_10360 (icd)
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GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
UTO03410
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All DBs
Position
2165262..2166515
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AA seq
417 aa
AA seq
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MESKVVVPAEGKKITVDAQGKLVVPHNPIIPFIEGDGIGVDVTPAMIHVVDAAVKKAYHG
ERKISWMEIYTGEKSTHVYGKDVWLPDETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALR
QQLDLYVCLRPVRYYQGTPSPVKQPELTDMVIFRENAEDIYAGIEWKAGSAEADKVIKFL
RDEMGVKKIRFPEQCGIGVKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEG
AFKDWGYELAREEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVI
ACMNLNGDYISDALAAQVGGIGIAPGANIGSDCALFEATHGTAPKYAGQDKVNPGSIILS
AEMMLRHMGWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIVKHM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaagtagttgttccggcagaaggtaaaaaaatcacggttgacgcccagggt
aaactggttgttcctcataacccgatcattccgttcatcgaaggcgacggcatcggcgtt
gacgtgactcctgccatgatccacgtggttgatgcggccgttaaaaaggcttaccacggc
gaacgtaaaatctcctggatggaaatctacaccggcgaaaaatctacccacgtttacggt
aaagacgtgtggctgccggacgaaactctggacctgatccgcgactaccgcgtcgccatc
aaaggccccctgaccaccccggtcggcggcggcatccgttctctgaacgtggccctgcgc
cagcagctggacctgtacgtgtgcctgcgcccggtgcgttactaccagggcaccccaagc
ccggtgaaacagcctgagctgaccgacatggtgatcttccgcgaaaacgccgaagacatc
tacgccggcatcgagtggaaagccggctccgccgaagcggacaaagtgatcaaattcctg
cgcgacgaaatgggcgtgaagaaaatccgcttcccggagcagtgcggtatcggcgtgaag
ccatgctccgaagaagggaccaagcgtctggtgcgtgcggcgatcgaatacgccatcacc
aacgaccgtgactccgtgaccctggttcacaaaggcaacatcatgaagttcaccgaaggt
gccttcaaggattggggctatgagctggcgcgcgaagagttcggcggcgagttgatcgac
ggcggcccatggctgaagatcaagaacccgaacaccggcaaagagatcgtggttaaagac
gtgatcgccgacgccttcctgcagcagatcctgctgcgcccggcggaatacgacgtgatc
gcctgtatgaacctgaacggcgactacatctccgacgccctggcggcccaggtcggcggc
atcggcatcgcgccgggcgccaacatcggctccgactgcgccctgttcgaagcgactcac
ggcaccgcgccgaagtacgccggccaggacaaagtgaacccaggctccatcatcctgtct
gcagagatgatgctgcgtcacatgggatggttcgaagcggctgacctgatcgttaagggc
atggaaggcgccatcgccgccaagaccgtgacctatgacttcgaacgcctgatggaaggc
gctaaactgctgaaatgttcagagtttggcgacgctatcgttaaacacatgtaa
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