Serratia nematodiphila: NLX84_10790
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Entry
NLX84_10790 CDS
T08619
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_10790 (kdgR)
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
IclR family
NLX84_10790 (kdgR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HTH_5
MarR_2
HTH_11
TrmB
HTH_45
MarR
PadR
FUR
Fe_dep_repress
Rrf2
HTH_6
Mga
Dimerisation2-like_dom
HTH_34
HTH_Crp_2
HTH_26
Motif
Other DBs
NCBI-ProteinID:
UTO03490
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Position
2249859..2250650
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AA seq
263 aa
AA seq
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MANADSDKQPDAVSSVMKVFGILQALGDEREIGITELSQRVMMSKSTVYRFLQTMKALGY
VSQEGETEKYALTLKLFELGAKSLQNVDLIRSADVQMRELSNRTRETIHLGALDEDGIVY
IHKIDAMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDREEVAQILSQIEFIRSTEHTLTSA
AELLLELERVREQGFGEDVEEQEAGIRCIAVPVFDRFGVAIAGLSISFPTLRFSDAAREE
YVALLHVAARRISEQQGYHDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcagattcagacaagcaaccggatgccgtctcatccgtgatgaaggtgttc
ggcattttgcaggcgcttggcgatgagcgcgagattggcattaccgaactgtcccagcgg
gtgatgatgtccaaaagcaccgtctaccgttttctgcaaaccatgaaagcgctgggctac
gtctcgcaggaaggcgagacggaaaagtatgcgctgacgctcaagctgttcgaactgggc
gccaaatcgttgcagaacgtcgatctgatccgcagcgccgacgtgcagatgcgcgaactg
tcgaaccgcacccgcgaaaccatccacctcggcgccctggatgaggacggcattgtctat
atccacaagatcgacgcgatgtacaacctgcgcatgtattcgcgcatcggtcgtcgcaac
ccgctgcacagcaccgccatcggtaaagtgctgctggcctggcgcgatcgggaggaggta
gcgcagatcctgtcgcagattgaatttatccgcagcaccgagcataccctgaccagcgcc
gccgaactgttgctggagctggagcgggtgcgtgagcagggattcggcgaagatgtcgaa
gagcaggaggcggggatccgctgcatcgcggtgccggtctttgacaggttcggggtggcg
atcgccgggctgagcatctctttcccgacgctgcgcttttccgacgcggcgcgggaggag
tatgtggcgttgctgcacgtcgccgcccggcgcatttccgagcagcagggctatcacgac
tacccgttctga
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