KEGG   Serratia nematodiphila: NLX84_11990
Entry
NLX84_11990       CDS       T08619                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
snem  Serratia nematodiphila
Pathway
snem00550  Peptidoglycan biosynthesis
snem01100  Metabolic pathways
snem01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:snem00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NLX84_11990 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    NLX84_11990 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:snem01011]
    NLX84_11990 (mrdA)
Enzymes [BR:snem01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NLX84_11990 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:snem01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   NLX84_11990 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: UTO03706
LinkDB
Position
2499933..2501858
AA seq 641 aa
MALLKEKIRDHSAEERLFIRRAGVALALVVVCFGALIVNLYRLQIRQHGFYQTRSNQNDI
KMLPLAPSRGLIFDRNGTPLVRNVTLYRVEITPSKITDMAALLQALTPIVDLTPEDISAF
RDDMRHNSRYKPVTLKTGLSDTEVARFAVNQYRFDGVTIDTYQQREYPYGAQLAHVLGYV
SKINDSDLKRLDKAGLSENYAADRNIGKQGIEAYYESELHGTTGYQEVEVDNHGRVIRLL
KEQPPKAGKNIYLTLDLPLQQYIESVLKGQRAAVVVEDPRDGGILAMVSSPSYDPNPFVK
GIGYQAYKALLRNPDLPLINRVTQGLYPPASTVKPYMAVSALFAGVITPATTFFGAPTWT
LPGTERRYRDWLKTGHGMLNVTKAIEESADTFFYQVAYEMGIDRIHHWLSQFGYGQSTGI
DLNEEYRGVLPSRDWKLKVHKKGWYQGDTVSVGIGQGYWVATPIQMVKALSTLLNNGRVK
TPHLLYSLQQGNRVTRYQPPAQTAQIGDPNSPYWGIVRNGMYGMANLPNGTGYKLFHTAP
YQIAAKSGTSQVFSLKQNQTYNAKMIPVRLRDHIFYTLFAPYKNPRVAMALILENGGGDG
VVAGPTARAILDHIFDPANAPQPGDTPQSKPQLNDSADVQR
NT seq 1926 nt   +upstreamnt  +downstreamnt
atggccctgttaaaagaaaaaattcgcgaccactctgcggaagagaggctgtttatccgc
cgggcaggcgtagcgctggcgctggtggtggtctgcttcggcgcgctgatcgttaacctc
taccggctgcaaatccgccagcacggcttttaccagacgcgttccaaccagaacgacatc
aagatgctgccgctcgcccccagccgcgggttaatcttcgatcgcaatggcactccgctg
gtgcgaaacgtgacactgtatcgtgtcgaaatcacgcccagcaaaatcaccgacatggcg
gcgctgctgcaggcgctgacgccgatcgtcgatctgacgccggaagacatcagcgcgttt
cgtgacgatatgcgccacaacagccgctacaagccggtgacgctaaaaaccgggctgagc
gacactgaggtggcgcgctttgccgtcaatcaataccgtttcgacggggtgaccatcgat
acctatcagcagcgtgaatatccttacggcgcccagctggcgcacgtgctgggctatgtg
tcgaagatcaacgacagcgatctcaagcgcctggacaaggccggcctgagcgagaactac
gccgccgaccgcaatatcggcaaacagggtatcgaggcctattacgaatccgaactgcat
ggcaccaccggttatcaggaggtggaggtggataaccatgggagggtgatccgcttgctg
aaggaacagccgccgaaggccggcaaaaacatttacctgacgctggatctgccgctgcag
cagtacatcgaatcagtgctgaaggggcaacgcgccgcggtggtggtggaagatccgcgc
gacggcggcattctggcgatggtctccagccccagttacgatcccaatcccttcgtcaaa
ggcatcggctatcaggcctataaggcgctgctccgcaacccggatctgccgctcatcaac
cgcgttacccaggggttgtacccgccggcttccacggtgaagccctacatggccgtttcg
gcgctgttcgccggggtgatcacgcccgccaccacctttttcggcgcgccgacctggacg
ctgcccggcaccgagcggcgctaccgcgactggctgaaaaccggccacggcatgctcaac
gtcaccaaagcgattgaagagtccgccgacaccttcttttatcaggtggcgtatgagatg
ggcatcgatcgcattcaccactggctgagccagttcggttacggccagtcgaccggcatc
gatctgaacgaagagtaccgcggcgtgctgccgagccgcgactggaagctgaaggtgcac
aaaaagggctggtatcagggggatacggtctcggtgggcatcggccaggggtattgggtg
gcgacgccgatccagatggtgaaagccttgagcacgctgctcaacaacggccgggtgaaa
acgccgcatctgttgtattcgctgcagcagggcaaccgggtgacgcgctaccagccgccg
gcgcaaacggcgcagatcggcgatcccaactcgccttactggggcatcgtgcgcaacggc
atgtacggcatggccaacttgccgaacggcaccggttacaagctgttccacaccgcgccg
tatcagatcgccgccaaatccggcacctcgcaagtgttcagcctgaagcaaaaccagact
tacaacgccaaaatgatcccggtgcggctgcgcgatcacatcttttatacgctgtttgcg
ccctacaaaaatccccgggtggcgatggcgctgatcctggaaaacggcggcggcgacggc
gtggtggcggggccgaccgcgcgcgcgatcctcgaccacatttttgacccggccaacgcg
ccacagcccggcgatacgccgcaaagtaaaccgcagttaaacgacagcgcggatgtgcaa
cggtga

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