Serratia nematodiphila: NLX84_12195
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Entry
NLX84_12195 CDS
T08619
Name
(GenBank) radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
snem
Serratia nematodiphila
Pathway
snem00860
Porphyrin metabolism
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NLX84_12195
Enzymes [BR:
snem01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
NLX84_12195
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GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
UTO03743
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Position
complement(2542036..2543484)
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AA seq
482 aa
AA seq
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MNDEALHSLLDIDENYPTPRVNAFLAQPENRAFLEYVHKDPFGCHVFPGDLVDYPLAAFF
ADMEADIRQAGKIHLWAYIPTCRYRCHFCQYPTVILNPKAPASQAVFRDLVDFNIKEAQM
WLARVPSLAEVEIGEFNVFGGTPSLLPEPELRRMMAFYFSHFNFTNATLRFEGEPGTLNK
AYLALLKELGFSKISFGTQSFNDDIITACGRMHSAEECVETIHHARALGIDWVSVDLIYG
MLGQSVDDVKYDMEKALELNLSHVVCTKLHMDEFIKNRTGVSGERESLWQKKGLISINNL
RFPGLGKQYQMRELVENYLNGGYTEHPTMYFHRNDQQPEKWKALITDLDKQYPEVAIGLG
GSSKSTRSEAINITGYKKYKEALNQDRLPIEESRGFSPIQREVNAFKMALSTLLPVDDRV
FKRRFDGNSLFANPVIRRTLKTLVDKALVTVDGSCVTLTPIGVTLVEAIINTQFSAAFAN
QE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaagccttgcactcattgctggatatcgatgaaaactatcccacgccgcgg
gtgaacgcgttcctggcgcaaccggaaaaccgggcctttctggagtacgtccataaggat
ccgttcggctgtcacgtgttccccggcgatctcgtcgactacccgctggccgcgtttttt
gccgatatggaggccgacattcgccaggcgggcaaaatccacctctgggcctatatcccg
acctgccgctatcgctgccatttttgtcagtaccccacggtgatcctcaatcccaaggcg
cccgcctctcaggcggtattccgcgatttggtcgatttcaacatcaaggaggcgcaaatg
tggctggcgcgcgtgcccagcctggccgaagtggaaatcggcgaattcaacgtctttggc
ggcacgccgtccttgctgccggagccggaactgcgccgcatgatggccttctacttcagc
cactttaacttcaccaacgccaccctgcgcttcgaaggggagcccggcaccctgaacaaa
gcctatctggcgctgctgaaagagctcggcttcagcaaaatcagtttcggcacccaatcc
ttcaatgacgacatcatcaccgcctgcgggcgcatgcactcggccgaagagtgcgtggag
accattcatcacgcgcgcgcgctcggcattgattgggtcagcgtggatctcatttacggc
atgctgggccaaagcgtggacgacgtgaaatacgacatggaaaaagccctcgagctgaat
ctgtcgcacgtcgtctgcaccaagctgcacatggatgagtttattaaaaatcgcaccggc
gtctcgggcgagcgcgaaagcctgtggcagaaaaaggggctgatcagcatcaacaacctg
cgcttccctgggctgggcaaacagtaccaaatgcgcgagctggtcgagaactacctgaat
ggcggctataccgaacaccccaccatgtactttcaccgcaatgaccaacagccggaaaag
tggaaagcgctcatcaccgatctcgacaagcagtatccggaagtggcgatcggtttgggc
ggtagctccaaatcgacgcgatccgaagccatcaacatcaccggctacaagaagtacaag
gaagcgctcaaccaagaccgcctgcccatcgaggaaagccgcggcttctccccgatccag
cgtgaagtgaacgccttcaaaatggcgctctccaccttgctgccggtggacgatcgggtg
tttaaacggcgctttgacggcaacagcctgtttgccaacccggtcatccgccgcacgttg
aaaaccctggtggataaagcgctggtcaccgtcgatggttcgtgcgttacgctcacgccc
atcggcgtcacgctggtcgaagccattatcaatacccaattttccgccgcattcgccaat
caggagtga
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