Serratia nematodiphila: NLX84_12465
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Entry
NLX84_12465 CDS
T08619
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_12465
Transporters [BR:
snem02000
]
Other transporters
Pores ion channels [TC:
1
]
NLX84_12465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UTO03790
LinkDB
All DBs
Position
2604879..2607068
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AA seq
729 aa
AA seq
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MKTKNKGIANGNTEAMSARRLLLGSALALLPLAQHASAAADETILVTADAQNSVTAPVKG
IVAKESAAGTKTAASLRKTPQSISVVTREQMNDQEPASVADALNYTSGVITTYRGNSNRN
DEVISRGFRYAPKLLDGLHFGLSSQNGGAGQIDPWLLERVEMVHGPAGVLYGQVSPGGVV
VMTSKRPTAQSIHEVKFSTGNRHLAETAFDFGGKLNDDNTLFYRLNGIARTEHEFVKDSK
QQRVAIAPAFTWLPNEDTSFTLLTSYQNDPKAGSRNFLPRAGTLFPTSAGYVPYDFNISE
PSFNKSRREQASIGYSLEHNFSDALSFTQNLRFTHRDEDYKYLVYNVNSKVNDHTVTRMA
QHETQMTNEFGVDNQLKGLFDTGEVKHTVLGGLDYRYSHIDSKMYRDRGNDYPIDWANPV
RPSIDGSTLALASSDLKTLNQVGVYLQDQLEWNHWNLLLSGRQDWSQVNTRDRTSGGKEQ
TYNDAQFTGRAGLLYAFDNGISPYVSYSTSFDPNLYPSAPGADPLKPTTGKQTEVGVKYQ
IPGGNTLLTLSWFDITQRNVASYNRLTSAYEQIGEVKSKGIEAEVHAQPTPEIKLIAAYT
YTDVVTKDSNSADEIGHSPAGIPRHAASAWGSYSFLSGALNGLTVGSGVRYIGDAPADAI
GQYDVPHYTLYDAMVKYDLGQASSALRGAALQLNVQNLTDKKYVSSCSGEYACFYGSGRS
IIASVNYRW
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaaaaacaaagggatagctaacgggaatacggaggcgatgtccgccaggcgt
ctgttgctgggatcggcgctggcgttattgcccttggcgcaacacgcgtctgcggcagcg
gacgaaacgattttggtgaccgccgacgcgcaaaacagcgtgaccgcgccggtcaaaggg
atcgtcgccaaagagagcgccgccggcaccaagaccgccgcctctctgcgcaagacgccg
cagtccatctccgtggtcacgcgcgagcaaatgaacgaccaggagccggcgtcggtcgcc
gacgcgctgaactacaccagcggggtgatcaccacctaccgcggcaactccaaccgcaat
gacgaagtgatcagccgcggcttccgctatgcgcccaaactgctcgacggtctgcacttt
ggcctctcgagccaaaatggcggcgccgggcagatcgacccctggctgctggagcgcgtg
gagatggtgcacggcccggccggcgtgctgtacggccaggtcagccccggcggcgtggtg
gtgatgaccagtaaacgccctaccgcccagagcattcacgaagtcaaattcagcaccggc
aaccgccatctggcggaaacggcgttcgatttcggcggcaaactcaacgacgacaacacc
ctgttctatcgcctgaacggtatcgccagaaccgagcacgagttcgtcaaagacagcaag
cagcaacgggtggccatcgcgccggccttcacctggctgccgaacgaagacaccagcttt
acgctgctgaccagctaccagaacgatccgaaagccgggtcgcgcaacttcctgccgcgc
gccggcacgctgttcccgaccagcgcgggctatgtgccctatgacttcaacatcagcgaa
cccagcttcaacaagtcgcggcgcgagcaggcatcgattggctacagcctcgagcacaac
ttcagcgatgcgctgtcgtttacccagaacctgcgcttcacccaccgtgatgaggactat
aaatacctggtttataacgtaaactcgaaggtcaacgaccacaccgtcacccgcatggcg
cagcatgaaacgcagatgaccaacgagtttggcgtggataaccagctgaagggcctgttc
gacaccggcgaggtgaagcacacggtgctgggcggattggattaccgctacagccatatc
gattcgaagatgtatcgcgatcgcggcaacgattacccgatcgactgggccaacccggtt
cgccccagcatcgatggcagcacgctggcgctggcttccagcgatttgaagacgctgaat
caggtcggggtgtatctgcaggaccagctggagtggaatcactggaacctgctgctgtcc
ggccgtcaggactggtcgcaggtcaacacccgcgatcgcaccagcggcggcaaagagcag
acctacaatgatgcccagttcaccggccgtgcgggcctgctctacgccttcgacaacggc
atttcgccgtacgtcagctacagcacctcgttcgatcctaacctgtacccgagcgcgccg
ggcgccgacccgctcaagccgaccaccggcaaacaaaccgaggtgggcgtgaagtaccag
atcccgggcggcaacaccctgctgaccctttcctggttcgacattacccagcgcaatgtg
gcgtcttacaaccgcctcacctccgcctacgagcagatcggtgaggtgaaatccaaaggg
attgaggcggaagtgcacgctcagccgacgccggagatcaagctgatcgccgcctacacc
tacaccgacgtggtgaccaaagactccaactcggcggacgaaatcggccacagcccggcg
ggcattccgcgccacgcggcgtccgcctggggcagctacagcttcctgagcggcgcgctc
aacggcctgaccgtcggcagcggcgtgcgttacatcggcgatgcgccggccgacgccatc
ggccagtacgacgtgccgcactacacgctgtacgacgccatggtgaagtatgacctcggt
caggcttcgtcggcgctgcgcggcgctgcgctgcagctcaacgtgcagaacctgacggac
aagaaatacgtttcgtcgtgcagcggcgagtacgcctgcttctacggcagcggccgcagc
attatcgcttcggtcaactaccgctggtaa
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