Serratia nematodiphila: NLX84_13965
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Entry
NLX84_13965 CDS
T08619
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snem
Serratia nematodiphila
Pathway
snem00061
Fatty acid biosynthesis
snem00071
Fatty acid degradation
snem01100
Metabolic pathways
snem01212
Fatty acid metabolism
snem02024
Quorum sensing
snem04146
Peroxisome
Module
snem_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NLX84_13965 (fadD)
00071 Fatty acid degradation
NLX84_13965 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NLX84_13965 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLX84_13965 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snem01004
]
NLX84_13965 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snem04147
]
NLX84_13965 (fadD)
Enzymes [BR:
snem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NLX84_13965 (fadD)
Lipid biosynthesis proteins [BR:
snem01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NLX84_13965 (fadD)
Exosome [BR:
snem04147
]
Exosomal proteins
Exosomal proteins of breast milk
NLX84_13965 (fadD)
Exosomal proteins of breast cancer cells
NLX84_13965 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
UTN99546
LinkDB
All DBs
Position
complement(2927506..2929194)
Genome browser
AA seq
562 aa
AA seq
DB search
MDKVWLKRYPADVPAEIDADRYSSLIEMFEHAVQRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQNELGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYNL
PDAISFRSALQRGRRLQYVKPDIINADLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYSPLFREGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIPGLVKELGKYPF
TAMSGVNTLFNALLNNEEFHKLDFSTLRFSVGGGMSVQKAVAEKWEKTTGKHLLEGYGLT
ECAPLVAGNPYDLKHYSGSIGLPVPSTDIRLVDDNGQDVPPGEPGELWVKGPQVMLGYWQ
RPGATDEVLKDGWLATGDVVTVDEQGFVRIVDRKKDMILVSGFNVYPNEIEDVVSQHPKV
LECAAIGVPSEVSGETVKICVVKKDASLTKEELLTHCRRHLTGYKVPKIVEFRDELPKSN
VGKILRRELRDELKTPKPADAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggataaggtctggttaaaacggtatccggcagatgtgcccgcagagattgatgccgat
cgctattcgtcgttgatcgaaatgtttgagcatgccgtgcagcgctatgccgatcagccc
gcctttatcaatatgggcgaggtgatgaccttccgcaaactggaagaacgcagccgggct
ttcgcggcttacctgcaaaatgaactgggcctgaagaagggcgaccgcgtcgcactgatg
atgcctaacctgttgcaataccccatcgccctgttcggcattctgcgcgccggcatggtg
gtggtcaacgtcaacccgctgtataccccgcgtgagctggagcaccagttgaacgacagc
ggcgccagcgccatcgtcatcgtgtccaacttcgcccatacgctggaaaaagtggtgttc
aacactcaggttaagcacgtgatcctgacgcgcatgggcgatcagctgtcggccgccaaa
ggtacgctggtcaacttcgtggtcaagtacgtcaagcgtctggtgcccaaatacaacctg
ccggacgccatttcattccgcagcgcgctgcagcgcggccgccgcctgcagtatgtaaaa
ccggacatcattaatgccgatctggccttcctgcaatatacgggcggcaccaccggggtg
gcgaagggcgcgatgctgacgcaccgcaacatgcaggccaacctcgagcaggccaaggcc
gcctattcgcctctgttccgcgaagggcaggaactggtggtgacggcgttgccgctgtat
cacattttcgcgctgacggtgaactgcctgctgtttatcgatctgggcgggcgcaatttg
ctgatcaccaacccacgcgacattccagggctggtgaaagaactgggcaaatatccgttc
accgccatgagcggggtgaatacgctgttcaacgcgttgctgaacaacgaagagttccac
aagctcgatttctctacgctgcgtttctcggtcggcggcggcatgtcggtgcaaaaagcg
gtggccgagaagtgggagaaaaccaccggtaaacacctgctggaaggttatggcctgacg
gagtgcgcgccgttggtggccggtaacccttacgatctgaaacactacagcggcagcatc
ggcctgccggtgccgtcgacggacattcgtctggtggacgacaatggccaggatgtaccg
ccgggcgaaccgggcgaactgtgggtcaaagggccgcaagttatgttaggctattggcag
cgcccgggcgccaccgacgaagtgctgaaagatggctggttggcgaccggcgatgtggtg
accgtagacgagcaggggttcgtgcgcatcgtcgaccgcaagaaagacatgatcctggtc
tccggtttcaacgtttacccgaacgagatcgaggacgtggtcagccagcatccgaaagtg
ctggaatgtgcggcgatcggtgtgccgagcgaggtctccggcgaaacggtgaagatctgc
gtggtgaagaaagacgcctcgctgaccaaggaagagctgctgacccattgccgtcggcac
ctgaccgggtataaagtgcctaaaattgttgagttccgcgatgaactgccgaagtctaac
gtcggcaagattttgcggcgagaactgcgcgatgagctaaaaacgccgaagccggccgat
gccgcctag
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