Serratia nematodiphila: NLX84_15625
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Entry
NLX84_15625 CDS
T08619
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
snem
Serratia nematodiphila
Pathway
snem00250
Alanine, aspartate and glutamate metabolism
snem00310
Lysine degradation
snem00350
Tyrosine metabolism
snem00650
Butanoate metabolism
snem00760
Nicotinate and nicotinamide metabolism
snem01100
Metabolic pathways
snem01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NLX84_15625 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NLX84_15625 (gabD)
00310 Lysine degradation
NLX84_15625 (gabD)
00350 Tyrosine metabolism
NLX84_15625 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NLX84_15625 (gabD)
Enzymes [BR:
snem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NLX84_15625 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NLX84_15625 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NLX84_15625 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UTN99855
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Position
3259075..3260550
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AA seq
491 aa
AA seq
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MSTSICATLKDPTLFREANYIDGQWLPAQEGRSIAIHNPANGERIGHVPAFGAEETARAI
AAAKKALPAWRALTAKERAGKLRRLFELMMENQEDLARIMTAEQGKPLAESRGEIAYAAS
FIEWFAEEGKRVYGDTIPQPQAGRRIIVQKEPIGVFAAITPWNFPAAMITRKAGPGWAAG
CTGVIRPASQTPFSALAIAVLAERAGLPAGVCNVITGPSKGIGGELTANPDVRKLSFTGS
TEVGAQLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVAGAVASKYRNAGQTCVCTNR
FLVQDGVYDAFAAKLKAAVAKLKVGNGLDDGVTIGPLINPDAVEKVREHIADAVEHGASV
LLGGKPDALGGNFFTPTILTDVPRTAKIFREETFGPVAPLIRFSQEADAVELANDTPFGL
AAYFYSRDIGRVMRVAEALEYGIVGINEGLISTEVAPFGGMKHSGLGREGSKYGIEDYLE
IKYLCLGGLGA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtatctgcgctaccctcaaggatcctacgctgttccgcgaggccaactac
atcgacgggcaatggttgccggcccaggaaggccgttcgatcgccattcataatcccgcc
aacggcgaacggatcggccacgtaccggccttcggcgccgaagaaaccgcacgcgccatc
gccgccgccaaaaaagcgctgcccgcctggcgcgcgttgaccgccaaagagcgcgccggc
aagctgcgccggctgtttgaattgatgatggaaaatcaggaagatctggcgcgcatcatg
acggcggaacagggcaaaccgctggccgaaagccgcggtgaaatcgcctatgccgcctcc
tttatcgaatggttcgccgaggaaggcaaacgggtgtatggcgacaccattccacagccc
caggccggtcgccgaatcatcgtgcaaaaagagccgatcggcgtgttcgccgccatcacc
ccgtggaacttcccggcggcgatgatcacccgcaaagccggccccggctgggccgcaggc
tgcaccggggtgatccgccccgccagccagaccccgttctcggcgctggcgatcgccgtg
ctggcggagcgcgccgggctgcccgccggggtatgcaacgtgataacaggccccagcaaa
ggcatcggcggcgaactcaccgctaacccggacgtgcgcaaactctccttcaccggcagc
accgaagtcggtgcgcagctgctggcccagtgtgcgcccaccatcaagaaaaccagcatg
gagctgggcggcaacgcgccgtttatcgtgtttgacgacgccgatctggacgccgccgtg
gccggcgctgtcgcctcgaaataccgcaacgccggccagacctgcgtctgcaccaaccgt
tttctggtgcaggacggcgtatacgatgccttcgcagccaaactgaaagccgccgtcgcc
aagctgaaagtcggcaacggcctggatgacggcgtcaccatcggcccgttgattaacccg
gacgcggtggagaaagtgcgcgagcatatcgccgacgccgtcgagcacggcgcctcggtg
ctgctgggcggcaagcctgacgcgctgggcggcaatttcttcaccccgactatcctgacc
gatgtgccgcgcacggcgaaaatcttccgcgaggagacgttcggcccggtggcgcccctg
atccgcttcagccaggaggccgacgccgtcgaactggccaacgacacgccgttcggcctg
gccgcttacttctacagccgcgacataggccgagtgatgcgcgtggccgaagcgctggag
tacggcattgtcggcatcaacgaagggttgatttccaccgaggtggcgccgttcggcggc
atgaagcactccggtttgggccgcgaaggatcgaagtacggcatcgaggactatctcgaa
atcaaatacctgtgccttggcggcctgggtgcctga
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