KEGG   Serratia nematodiphila: NLX84_15830
Entry
NLX84_15830       CDS       T08619                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
snem  Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:snem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:snem02044]
    NLX84_15830 (tssC)
Secretion system [BR:snem02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLX84_15830 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UTN99893
LinkDB
Position
complement(3321438..3322964)
AA seq 508 aa
MRARQRRYSAKQQATAVAEVETQDTENELDGLLKRSFRPRTNEASEAVRRAIGTLSEYAN
KGKVKVSQDVVLTIESLIAQIDEQLSQQMNNILHHKEFQKLESAWQGLSYLVDNTNVSET
LKIRVLNISQDELTRNLRRYRGSAWDQSPVFKQIYEQEYGQFGGEPFGCIIGDFEFDHSP
MSVTLLTELAKISAASHCPFISAASPSLLQMSKWNELGNPRDIGKIFTTPEYASWRRLRE
SNDSRYLVLTMPRFLSRLPYGAKTNPIEEFAFEESVRPDVDDDFSWANSAYAMGVNINRA
FHEYGWCSKIRGIESGGSVEELPAYAFPSDEGGYELTCPTEVAISDRREQELSDAGFLPL
VYRKHSDFAAFIGSCTMHAPAKYEDPDATANAKLSSRLPYIFATCRFAHYLKCIVRDKIG
SFRSRDDMQLWLNDWLMNYVDGDPSVSTEATKARRPLAAAEVRVEDVEDDPGYYRAHFYL
RPHYQLEGMTVSLRLVSKLPSAKKDGSR
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgagagcgaggcaacgacgctattcggctaagcagcaggctacggcagtcgctgaagtt
gaaacgcaggacacggaaaatgagcttgacggtttgctcaagcgttcattccggcccaga
acgaacgaggcttcggaagcggttcgtcgggctatcggcacgctgtccgaatatgccaac
aaaggcaaggtcaaggtcagccaggatgtcgtattgaccattgaatcgttgattgcccag
atcgacgaacagctttcgcaacagatgaacaatatcttgcaccacaaggagttccagaag
ctggagtccgcctggcaaggtctgagttatctggtcgataacaccaacgtcagcgaaacg
ctcaagatccgggtgttgaacatcagccaggatgagctgacgcgcaatttgcgccgctat
cggggctccgcctgggatcaaagcccggtgttcaaacagatttacgaacaggaatatggt
cagttcggcggcgagccgttcggttgcatcatcggcgattttgaattcgatcacagcccg
atgagcgtcacgctgctgaccgagttggcgaaaatttccgcggcgtcgcactgtccgttc
atttccgccgcgtcgccgtcgctgctgcagatgagcaagtggaacgaactgggcaacccg
cgggatatcggcaagattttcaccacgccggaatatgcgtcctggcgccgcctgcgcgaa
agcaacgactcgcgttacctggtgttgacgatgccgcgtttcctgtcgcgtttgccttac
ggggcgaaaaccaacccgatcgaagagttcgctttcgaggagtccgtcaggccggatgtg
gatgatgatttttcctgggccaactcggcgtatgcgatgggcgtcaacatcaaccgcgcg
ttccatgagtacggctggtgttcgaagattcgcggcatcgaatccggcggctcggtggaa
gaactgcccgcctacgcgtttccttccgatgagggcggatatgaactgacgtgcccgacg
gaagtggccatttccgatcggcgcgagcaagagctttccgacgccgggttcttgcccctg
gtctatcgcaagcattccgatttcgccgcttttatcggttcttgcaccatgcacgcgccg
gcgaaatacgaggatcccgacgcgacggccaacgccaagctgtcttcgcgcttgccttat
attttcgccacgtgccgattcgcgcactatttgaaatgcatcgtgcgcgacaaaatcggt
tctttccggtccagggacgatatgcagctgtggctgaatgactggctgatgaactacgtc
gatggcgatccttccgtatcgaccgaggcgaccaaggcgcgtcgtccattagccgccgcc
gaggtgcgcgttgaggatgtggaagatgatccgggttattaccgcgcgcatttctatttg
cgcccgcattaccagttggaaggcatgaccgtgtccttgcgacttgtatcaaaacttccg
tcagccaaaaaagatgggagcagataa

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