Serratia nematodiphila: NLX84_16035
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Entry
NLX84_16035 CDS
T08619
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05804
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_16035
03036 Chromosome and associated proteins [BR:
snem03036
]
NLX84_16035
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NLX84_16035
Chromosome and associated proteins [BR:
snem03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NLX84_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GyrI-like
Cass2
Motif
Other DBs
NCBI-ProteinID:
UTN99926
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All DBs
Position
3364488..3365375
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AA seq
295 aa
AA seq
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MFITKVIEELLAWVEESGFNEKLTVEMLSEKSGYSRGHIQKAFKDETGMTFGSYVRGRKL
IRAAFMLKATNLSISDIVKTLNFQSYQSFERAFRKQFRTSPMQYRKSKSWDVSSAIPLLF
LDGIPEHRYVHLPKFFDDSGDGVDAEIYHFHPAVSALRLAAIDNMKKTDSGVINFFNFGA
SIKKENYVSIYLKTLYISEEDCLGSVLASLADAQGKKDMQLFAEFSFDGASDEAQKFTQS
IYTKSFPINKVGMIDRFLIEIITPKGGDRIEMKTYIPIVFPIKHREKEVAPGPER
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaccaaagtcattgaggagctgctcgcctgggtggaagaaagtgggttcaat
gagaagctcaccgttgagatgctgtcagaaaaaagcggatattcacgcgggcatatccaa
aaagcgtttaaagatgaaacagggatgactttcggaagctatgtgaggggcagaaaactc
attcgcgccgcatttatgttgaaagcgacgaacctctctatttccgatatcgttaaaacg
ctaaattttcagtcatatcaatcatttgagcgagctttccgcaagcaattcagaacctcg
ccgatgcagtatcgcaaaagtaaatcgtgggacgtgtcctccgccatcccattgctgttt
ctcgacggcattcccgagcatcgctatgtgcacctgccaaagtttttcgacgattcaggg
gatggcgttgatgcagaaatatatcacttccatcctgcggtttccgcgctgcgattggcg
gcaattgataacatgaaaaaaacggatagcggcgtgattaactttttcaattttggcgcg
agcatcaagaaagagaattacgtcagcatctatttgaagaccctctatatttcagaagaa
gactgtcttggcagcgtgcttgcctccctggccgacgcccagggaaaaaaagacatgcaa
ctttttgcagagttcagttttgacggcgcaagcgatgaggcgcaaaaattcacgcaaagt
atctacaccaaatcattcccgataaataaagttggcatgatcgatcgctttctcattgaa
atcatcacccccaaaggcggcgatagaatagagatgaagacctatatccccattgtcttc
cctatcaagcacagagagaaagaggtagcgcctgggccagagcgctaa
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