Serratia nematodiphila: NLX84_16275
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Entry
NLX84_16275 CDS
T08619
Symbol
livM
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM
KO
K01998
branched-chain amino acid transport system permease protein
Organism
snem
Serratia nematodiphila
Pathway
snem02010
ABC transporters
snem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLX84_16275 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLX84_16275 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_16275 (livM)
Transporters [BR:
snem02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
NLX84_16275 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
DUF6097
Motif
Other DBs
NCBI-ProteinID:
UTN99967
LinkDB
All DBs
Position
complement(3418492..3419778)
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AA seq
428 aa
AA seq
DB search
MSQFVINGGLDVKRSLLDAVLAGLIALIVFGPIVGIVLNGYSFNFEPHRLVWIIAAVMAG
RLLLSLFLQTAPGRRVLARFDGGNDGVYVRPLGYKSNLRWILPLMAAIALLFPFVATKYL
LTVAILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWAMLPLG
ALMAALAGALLGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWMSLTGGPNGVSVPAPTVFG
LEFGRRAKDGGVPIHEFFGIDYNPNLKFIFIYAVLFLVVLLVLYIKHRLTRMPIGRAWEA
LREDEIACRSLGLNHVLVKLSAFMLGASTAGLAGVFFATYQGFVNPTSFTFFESALILAI
VVLGGMGSTLGVVLAAFVLTVAPELLRSFAEYRVLLFGVLMVAMMIWRPRGLVRISRSSF
AERKGVAP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattcgtaatcaacggcgggctggacgtcaaacgcagcctgctggacgccgtt
ttggccgggctgatcgccctgatcgtgttcgggccgatcgtcggcatcgtgctgaacggc
tacagcttcaacttcgagccgcatcggctggtatggatcatcgccgcggtgatggccggg
cggctgctgctgagcctgttcctgcaaaccgcgccggggcgcagggtgttggcgcgcttc
gacggcggcaacgacggcgtttacgtgcggccgctgggctataaatccaacctgcgctgg
atcctgccgctgatggcggcgatcgcgctgctgttcccgtttgtcgccaccaaatacctg
ctgacggtggcgatcctcggcctgatctacgtgctgctcggcctggggctgaacattgtg
gtcgggctggcggggctgctcgatctggggtacgtggcgttttacgccattggcgcctac
gggctggcgctgggctaccaatatctcgggctggggttttgggcgatgctgccgctgggg
gcgctgatggcggcgctggccggcgcactgctgggttttccggtgctgcgcatgcacggc
gactacctggcgatcgttacgctggggttcggcgagatcattcggctggtgctgaacaac
tggatgtcgctcaccggcgggccgaacggcgtctcggtgccggcgccgacggtgttcggc
ctggagttcggccggcgcgccaaagacggcggggtgccgatccacgagtttttcggcatc
gattacaacccgaatctcaagtttattttcatctacgcggtgctgtttttggtggtgttg
ctggtgctgtatatcaagcaccggctgacgcgcatgccgatcggccgcgcctgggaggcg
ctgcgcgaggatgagatcgcctgccgttctctggggctgaatcacgtgttggtgaagctg
tcggcgtttatgctcggcgcttccaccgccgggctggcgggggtgttcttcgccacctac
cagggcttcgtcaacccgacttcgttcaccttcttcgagtcggcgctgatcctggcgatc
gtggtgctgggcggcatgggctccaccctcggcgtggtgctggcggccttcgtgctgacg
gtggcgccggagctgctgcgcagcttcgccgaataccgggtgctgctgttcggcgtgctg
atggtggcgatgatgatctggcggccgcgcgggctggtgcgcatcagccgatccagcttc
gccgaacgcaagggggtggcgccatga
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