Serratia nematodiphila: NLX84_16550
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Entry
NLX84_16550 CDS
T08619
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_16550
Transporters [BR:
snem02000
]
Other transporters
Pores ion channels [TC:
1
]
NLX84_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
BBP2
DUF915
Motif
Other DBs
NCBI-ProteinID:
UTO00018
LinkDB
All DBs
Position
3477803..3479791
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AA seq
662 aa
AA seq
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METPRYSKLAALVIASLSATAALAAPQDDTQDTMVVTASGFQQKIQDSAASISVIPRQQI
EDKAYRDVTDALKDVPGVVVTGGASSSDISIRGMSSKYTLILVDGKRVDTRGTRPNSDNA
GIEQGWLPPMEAIERIEVVRGPMSSLYGSDAMGGVINVITRKTSRTEWKGSLHGDATLQE
NHDSGDLFQTNAYASGPLVEGLLGLRVNGLLSRRAEDKITNGYNEQRMRSGTAVFTLTPD
EKNEFDFEIGRSLQDRNSTPGKSVVAERCSKGKCTPTSRSESLYTRTNYALTHNGYYDFG
NSTSYVQREETNNPGRKMKMYNTIFNTQNQFELGSHMLNLGGQYRYEKLSDSGNQLESAQ
GLSKLTRWSWALFAEDEWALTNDFSLTTGIRMDQDENFGSHWTPRMYGVWHLTEQWTLKG
GVSAGYKSPDLRQSSANWGQVTGGGVRKGIIVGNPDLQPEKSLSEEIGLMWDSLKGVNAG
VTVFNTDFKNKITEVRRCEDTPDCKIGNDVYDFISDRVNVDKANMRGVEATFGWQINKDW
KWNTNYTYTSSEQKSGEFQGKALNQMPKHMVNTVLDWRATQDLSLWSRVNFRSKRSEYLS
RTSMAKSTPSYTFVDAGLSYQAAKNLQLTGGVYNILDKTVDYDHYNTTLDGRRYTVGMTY
NF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgccacgttacagcaagctcgccgctctggtgatcgcctcactcagcgccacc
gccgcgctggccgcgccgcaggacgacacccaggacaccatggtcgtcaccgcctccggc
tttcagcaaaaaattcaggactctgccgcttccatctcggtgatcccgcgccagcagatc
gaagataaagcctatcgcgacgtgaccgatgcgctgaaagacgtaccgggcgtagtggtc
accggcggcgccagcagcagcgacatcagcattcgcggcatgtcttccaagtacacgctg
atcctggtggacggcaagcgcgtcgacacccgcggcacccggccgaacagcgataacgcc
ggcatcgaacagggctggctgccgccgatggaagccatcgaacgtatcgaagtggtgcgc
gggccgatgtcttcgctgtacggttccgacgccatgggcggcgtgatcaacgtcatcacc
cgcaagacctcgcgcaccgagtggaaaggctcgctgcacggcgacgccacccttcaggaa
aaccacgattccggcgatctgttccagaccaacgcctacgcctccggcccgctggttgaa
ggcctgctcggcctgcgggtcaacggcctgctgtcgcgccgcgccgaagataaaatcacc
aacggttacaacgagcagcgcatgcgcagcggcaccgcggtgttcaccctgaccccggac
gagaaaaacgaattcgacttcgaaatcggccgctcgctgcaggatcgcaacagcacgccg
ggcaaatcggtggtagcggaacgctgcagcaaaggcaaatgcacgccgacatcgcgcagc
gaaagcctgtatacacgcaccaactacgcgctgacccacaacggctattacgacttcggc
aactccaccagctacgttcagcgggaagagaccaacaacccgggccgcaaaatgaagatg
tacaacaccatcttcaacacccagaaccagttcgagctgggttcacacatgctgaacctc
ggcggtcagtatcgctatgaaaaactgagcgacagcggcaaccagcttgaatcggcacaa
ggtctcagcaagctgacgcgctggagctgggcgctgttcgccgaagatgagtgggcattg
accaacgacttcagtctgacgaccggcatccgcatggatcaggacgaaaacttcggcagc
cactggacgccgcgcatgtacggggtctggcacctgaccgaacagtggacgctgaaaggc
ggcgtctccgccggctacaaatcgccggatctgcgccaatcctccgccaactggggccag
gtcaccggcggcggcgtgcgtaaaggcatcatcgtcggcaacccggatctgcagccggag
aagagcctgagcgaagagatcggcctgatgtgggatagcctgaaaggcgtcaacgccggg
gtgaccgtcttcaacaccgacttcaagaacaagatcaccgaagtgcgccgctgcgaagac
acgccggactgtaagatcggcaatgacgtctacgactttatcagcgatcgcgtcaacgtc
gacaaagccaatatgcgcggcgtagaagccaccttcggctggcagatcaacaaagactgg
aagtggaacaccaactacacctacacctcttccgagcagaagagcggcgagttccagggc
aaggcgctcaaccagatgccgaagcacatggttaacaccgtgctggattggcgcgccacg
caggacctcagcctgtggtcgcgcgttaatttccgcagcaaaaggtctgagtatctgagc
cgtacctcgatggccaagagcacgccgtcctacaccttcgtcgatgcgggcctgagctac
caggcggcgaaaaacctgcagctgaccggcggggtctacaacatcctcgacaagaccgtg
gattacgatcactacaacaccacgctggacggccgccgttacaccgtcggcatgacctac
aacttctga
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