Serratia nematodiphila: NLX84_16715
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Entry
NLX84_16715 CDS
T08619
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snem03400
]
NLX84_16715
DNA repair and recombination proteins [BR:
snem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NLX84_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DUF7577
SWI2_SNF2
Zn_ribbon_3
AAA_16
zf-tcix
AAA_30
SLFN-g3_helicase
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
UTO00050
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Position
3517676..3519433
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AA seq
585 aa
AA seq
DB search
MAFTLRPYQLEAVEATINHFRRRPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKESAGKVVFGSVQSVARNLPLFDGAFSLLIVDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGASLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEADLNRELKRQNRVTPH
IISQIVEYADDRKGVMIFAATVEHAREIHGLLPNGEAALVSAETPPAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPACGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDDKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWHTA
ADVLAQQQALRHPDFVVARKRGQFWQVREKVFDYQGRFRRANQLT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctacgcccctaccaactggaagcggtcgaagccaccatcaaccatttc
cggcggcgtcccgaaccggcgctgatcgtgctgccgaccggcgccggcaaaagcctggtg
atcgccgaactggcgaagcgcgcccgtgggcgggtgctggtgttggcgcacgtcaaggaa
ctggtggcgcaaaaccacgccaaatactgcgcctacggcctggaggcggacatcttcgcc
gccggtctgcaacaaaaagagagcgccggcaaagtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctgccgctgttcgacggcgccttttcgctgctgatcgtcgatgaatgccac
cgcatcagtgacgacgacgacagccagtaccaacaaatcatccagcatttgcagaaaacc
aacccgcagctgcggctgctggggttgaccgccacgccctatcgtctgggcaagggctgg
atttaccagtatcactaccacggttttacccgcggcgacggcgccagcctgtttcgcgac
tgcatctatgagctgccgctgcgctatatgattaagaacggcttcctggtgccgcctgag
cggctggacatgccgattgtgcagtacgatttcagccggctggaggccagaagcaacggc
ctgttcagcgaagcggatctgaaccgcgagctgaagcggcaaaaccgcgtcacgccgcac
attatcagccagattgtggagtacgccgacgatcgcaaaggggtgatgatcttcgccgcc
accgtcgagcacgcccgcgagatccacggcctgctgccgaacggcgaggccgcgctggtc
agcgcagaaacaccgcccgccgagcgcgatgcgctgatcgaggcgttcaaacaacagcag
ttgcgctatctggtcaacgtagcggtattgaccaccggtttcgacgcgccgcacgtcgat
ctgatcgcgatcctgcgcccgaccgagtccgtcagcctgtatcagcagatcgtcggccgc
gggctgcggctggcgcccggcaaggaggattgtctgatcctcgactatgccggcaacccg
cacgatctgttcacgccggaggtcggcgtcagcaagccgcacggcgacagccagccggtg
caggtgttctgcccggcctgcggcttcgccaatctgttctggggcaagtgcaccgagaac
ggcgatatcatcgagcactacggccgccgctgtcagggctggctggaagacgacgacggc
caccgcgaacagtgcgattaccgcttccggttcaagagctgcccgcactgcggcgcggag
aacgacatcgccgcacgccgctgccatcagtgtcaggaggtgctggtcgatcccgacgac
atgctgaaggcggcgctgaagctgaaagacgcgctggtgctgcgctgcggcggcatggaa
ctgcagagcggccgcgatgacaagggcgaatggctgaaggccacctattacgacgaggac
ggcaccagcaccagcgagcgcttccgcctgcagacgccggcgcagcgcaaagcgttcgag
atgctgttcctgcgcccgcaccagcgcgcgccgggcgtgccgttcgcctggcacaccgcc
gccgacgtgctggcgcaacagcaggcgctgcgccatccggatttcgtggtggcgcgcaaa
cgcggccagttttggcaggtgcgcgagaaagtgttcgattatcaaggccgtttccgccgc
gccaatcaattgacctga
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