Serratia nematodiphila: NLX84_16910
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Entry
NLX84_16910 CDS
T08619
Symbol
ompC
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
snem
Serratia nematodiphila
Pathway
snem01501
beta-Lactam resistance
snem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLX84_16910 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLX84_16910 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_16910 (ompC)
Transporters [BR:
snem02000
]
Other transporters
Pores ion channels [TC:
1
]
NLX84_16910 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
UTO00081
LinkDB
All DBs
Position
complement(3552175..3553305)
Genome browser
AA seq
376 aa
AA seq
DB search
MKLRVLSLMVPALLVAGTAGAAEIYNKDGNKLDLYGKVNGLHYFSSNNGVDGDQSYMRFG
LRGETQISDQLTGYGQWEYQANLNHAESQDNKNFTRYGFAGLKFGDYGSFDYGRNTGVLY
DVAAYTDLQPEFDGMTYGADQFMFQRSSGLATYRNNDFFGLVDGLNFALQYQGKNGNGEE
TNNGRDVLGQNGEGYGMSMSYDMGYGISAAGAFFNSRRTSEQNGGNGHQNIMGRGDKAEG
YSGGLKYDANDVYLAVMFTQSYNAARFGSSDSSVYGYANKAQSFEAYAHYQFDFGLRPFV
GYNQTKGKDLGRAGNGKDYGDQDLVKFVDLGATYFFNKNMSTYVDYKINLVDNNDFTDAA
GINTDNVVAVGLVYQF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcgagtactctctctgatggtacccgcactgctggttgcaggcacagcaggc
gcggcggaaatctacaacaaagacggtaataaactggatttgtacggtaaagtaaacggg
cttcactatttctccagcaacaacggcgtggacggcgatcagtcttatatgcgttttggc
ctgcgcggcgaaacgcaaatcagcgatcagctgaccggttacggccagtgggaatatcag
gcgaacctgaaccacgctgaaagccaggacaacaagaacttcacccgttacggcttcgcc
ggtctgaaattcggcgactacggttccttcgactacggccgtaacaccggcgtgctgtac
gacgtcgcggcgtataccgacttgcagcccgagttcgacggtatgacctacggcgccgac
cagttcatgttccagcgttccagcggcctggcgacctaccgtaacaacgacttcttcggt
ctggttgacggcctgaacttcgccctgcagtaccaaggtaaaaacggcaacggcgaagag
accaacaacggtcgtgacgttctgggccaaaacggcgaaggctacggcatgtccatgagc
tatgacatgggctacggcatcagcgcagcgggcgccttctttaactctcgccgcaccagc
gagcagaacggcggtaacggtcaccagaacatcatgggccgcggcgacaaggcggaaggt
tactccggcggtctgaaatatgacgccaacgatgtctacctggcggtgatgttcacccag
tcctacaacgcggcgcgtttcggcagctccgacagcagcgtttacggctacgccaacaag
gcgcagagcttcgaagcctatgcgcactaccagttcgacttcggtctgcgtccgttcgtg
ggctataaccagaccaaaggtaaagacctgggccgcgccggcaacggcaaggactacggc
gatcaagacctggtcaaattcgtcgacctgggtgcgacctacttcttcaacaaaaacatg
tctacctatgttgattacaaaatcaacctggtggacaacaacgatttcaccgacgctgcc
ggcatcaacaccgacaacgtggttgccgtgggcctggtttaccagttctaa
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