Serratia nematodiphila: NLX84_16940
Help
Entry
NLX84_16940 CDS
T08619
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snem03032
]
NLX84_16940 (gyrA)
03400 DNA repair and recombination proteins [BR:
snem03400
]
NLX84_16940 (gyrA)
Enzymes [BR:
snem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NLX84_16940 (gyrA)
DNA replication proteins [BR:
snem03032
]
Prokaryotic type
DNA Topoisomerases
NLX84_16940 (gyrA)
DNA repair and recombination proteins [BR:
snem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NLX84_16940 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
UTO00087
LinkDB
All DBs
Position
complement(3562074..3564716)
Genome browser
AA seq
880 aa
AA seq
DB search
MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPERLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEAVEEDSTPLDDGDDAAEPMDDDNV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggactatgcgatgtccgttattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggttcaccgccgcgttctgtacgcgatgagcgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaatatcacccgcac
ggtgacagcgcggtttacgacactatcgtgcgtatggctcagccgttttcactgcgctac
atgctggtggacggccagggtaacttcggttccgtcgacggcgactccgcggcggcgatg
cgttataccgaagtgcgcatgtccaagattgctcacgaactgttggcggatctggaaaaa
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgccg
accaagatcccgaacctgctggtcaacggctcgtcgggcatcgccgtgggcatggccacc
aatattccgccgcacaacctggcggaagtcgtcaacggctgcctggcctatatcgacgat
gaaaacatcagcatcgaagggctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggccgccgcggcattgaagaggcctaccgcaccgggcgcggcaaagtc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaagaccgggcgcgaaaccatcatc
gttcacgaaatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctg
gtgaaagaaaaacgcgtagaaggcatcagcgcgctgcgtgacgagtccgataaagacggc
atgcgcatcgtgatcgaagtcaaacgcgacgcggtcggcgaagtggtgctgaacaacctg
tatgcgctgacgcagctgcaggtcaccttcggcatcaacatggtcgcgctgcatcagggg
cagcctaagctgctgaacctgaaagatatcctcgaagccttcgtgcgccaccgccgcgaa
gtggtcacccgccgcaccatcttcgaactgcgcaaggcccgtgaccgcgcccatatcctg
gaagcgctggctatcgcgttggctaacatcgatccgatcatcgagctgattcgccgtgcg
ccgacgccggcggaagcgaaagtcgcgctggtggctcagccgtgggatctgggcaacgtc
agcgccatgctggaacgcgccggtgacgacgccgctcgccctgagtggctggagccggag
ttcggcatccgcgacggcaaatactacctgaccgagcagcaggctcaggctattctggat
ctgcgcctgcagaaactgaccggcctggagcacgaaaagctgctggacgaatataaagag
ctgctcaactttatcgccgagctgatctttattctggaaagcccagagcgcctgatggaa
gtgatccgcgaagagctggtggcggtcaaagagctgtacaacgacggccgccgcaccgag
atcaccgccaatacttccgacatcaacatcgaagacctgatcaaccaggaagacgtggtg
gtgaccctgtctcaccagggttacgtgaagtatcagccgctgtccgactatgaagcgcag
cgccgcggcggcaaaggcaagtccgccgcgcgtattaaagaagaagactttatcgatcgc
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtaccaactgcctgaagccagccgcggcgcgcgcggtcgcccaatcgtc
aacctgctgccgctggaagccgacgagcgtatcaccgccattctgccggtgcgcgagtat
gaagaagggcgccacgtgttcatggccaccgccagcggtaccgtgaagaaaactgcgctg
accgagttcagccgcccacgcagcgccggcatcatcgccgtcaacctcaacgagggcgac
gagctgatcggcgtcgatctgaccgacggcagcaacgaagtgatgctgttctccgccaac
ggtaaagtcgtgcgcttcccggaaacgcaggtgcgttcgatgggccgtaccgcgaccggc
gtgcgcggcatcaacctcggcgaaggcgacagcgtgatctcactgatcgtgccgcgcggc
gagggcgacatcctgaccgtgacgcaaaacggcttcggtaaacgcaccgcggtgaccgag
tatccgaccaagtcacgcgccacccagggggttatctccatcaaggtgagcgagcgtaac
ggccaggtggtcggcgcggtgcaggtggaaaccagcgatcagatcatgatgatcaccgat
gccggcacgctggtgcgtacccgcgtttcggaagtcagcgtggtcggtcgtaacacccag
ggcgtgacgctgatccgcacggcggaagacgaaaacgtcgtcggtctgcagcgcgtggcc
gaaccggtggaagacgaagagctggacagcctggaaccgggcgcggaagcggtggaagaa
gacagcacgccgctggacgatggcgacgacgcggctgagccgatggacgacgacaacgtt
taa
DBGET
integrated database retrieval system
