Serratia nematodiphila: NLX84_18395
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Entry
NLX84_18395 CDS
T08619
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
snem
Serratia nematodiphila
Pathway
snem02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLX84_18395 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_18395 (mdtC)
Transporters [BR:
snem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLX84_18395 (mdtC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UTO00343
LinkDB
All DBs
Position
3865751..3868831
Genome browser
AA seq
1026 aa
AA seq
DB search
MKFFALFIHRPVATTLLTLAIAISGAIGFRLLPVSPLPQVDFPVISISASLPGASPETMA
SSVATPLERALGRIAGVNEMTSMSSLGSTRVILQFDLDRDINGAARDVQAAINAAQSLLP
TGMPSRPSYRKVNPSDAPIMILTLTSDTYSQGQLYDFASTQLAQKISQTEGVGDVSVGGS
SLPAVRVELNPSALFNQGVSLDTVRQAIANANVRRPQGAVENPQQRWQIQANDALKTADA
YRPLIIHYNNGSAVRLADVAEVKDSVQDVRNAGMTDAKPAIILAISRAPDANIIETVDRI
RAELPALQENIPASIQLNVAQDRSPTIRASLAEVEQSLAIAIGLVILVVFIFLRSGRATL
IPAVAVPVSLIGSFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHVEAGMKP
INAALLGAREVGFTVLSMSVSLVAVFIPLLLMEGLPGRLFREFAVTLSVSIGLSLIVSLT
LTPMMCAYLLRHQPPRSQRRARGFGKMLLGLQQGYGRSLNWVLGHSRWVLAVFLATVALN
VWLYISIPKTFFPEQDTGRLMGFIQADQSISFQAMRGKLEDFMKIVREDPDVENVTGFTG
GSRTNSGSMFISLKPLSVRSDDAQKVIARLRARLAKEPGASLFLMAVQDIRVGGRQANAS
YQYTLLADDLAALREWEPKIRTALAALPELADVNSDQQDKGSEMDLVYDRETMARLGISV
SDANNLLNNAFGQRQISTIYQPLNQYKVVMEVAPPYTQDVSSLDKMFIINNEGKAIPLSY
FASWRPANAPLSVNHQGLSAASTVSFNLPDSGSLSDATAAVERTMTQLGVPSTVRGAFAG
TAQVFQDTLKSQLILILAAIATVYIVLGVLYESYIHPLTILSTLPSAGVGALLALELFGA
PFSLIALIGIMLLIGIVKKNAIMMVDFALESQRNGGISAREAIFQASLLRFRPIMMTTLA
ALFGALPLVLTRGDGAELRQPLGITIAGGLVMSQLLTLYTTPVVYLYFDRLQAKFRRNKQ
LAPLPH
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcttcgccctgttcattcaccggccggtggccaccaccctgctgacgctggcc
atcgccatcagcggcgcgatcggctttcgcctgctgccggtgtcgccgctgccgcaggtg
gattttccggtgatttcgatcagcgcgtcgctgccgggcgcctcgccggaaaccatggcg
tcttcggtggcgacgccgctggagcgcgcgctgggccgcatcgccggggttaacgaaatg
acctcgatgagctcgctcggcagtacccgggtcattttgcagttcgatctcgatcgcgac
atcaacggcgccgcgcgcgacgtgcaggcggcgattaacgccgcgcaaagcctgctgccg
accggcatgccgagccgccccagctaccgcaaggtcaacccttccgacgcgccgatcatg
atcctgacgctgacctcggacacctacagtcaggggcagctttacgatttcgcctccacc
caactggcgcagaagatcagccagaccgagggcgtcggcgacgtttccgtcggcggcagc
tcgctgccggcggtgcgggtggagctgaacccttcggcgctgttcaatcagggcgtgtcg
ctggacaccgtacggcaggccatcgccaacgccaacgtgcgccgcccgcagggcgccgtg
gaaaacccgcagcagcgctggcagatccaggccaacgacgcgctgaaaaccgccgatgct
tatcgtccgctgatcattcattacaacaacggctcggcggtgcgtttagccgacgtggcc
gaggtcaaagactcggtgcaagacgtgcgcaacgccgggatgaccgacgccaaaccggcg
atcattctggccatcagccgcgcgccggacgccaacatcatcgaaaccgtcgatcgcatt
cgcgccgagctgcccgccctgcaggaaaatatcccggcctcgattcaactcaacgtcgcg
caggatcgttcgccgaccatccgcgcgtcgctggccgaggtggagcagtcgctggcgatc
gccatcgggctggtgatcctggtggtgttcatcttcctgcgctccgggcgcgccacgctg
atcccggcggtcgccgtaccggtgtcgctgatcggctcgttcgccgccatgtatctgtgc
gggttcagcctcaacaacctgtcgctgatggcgttgaccatcgccaccggctttgtggtg
gacgacgctatcgtggtgctggaaaacatttcccgccacgtcgaggccggcatgaaaccg
atcaacgccgcgctgctgggcgcgcgggaggtcggtttcaccgtgctgtcgatgagcgtt
tcgctggtggcggtgtttatcccgctgctgctgatggaaggcctgcccggccggctattc
cgcgagttcgccgtcaccctgtcggtgtcgatcgggctgtcgctgatcgtctcgctgacg
ctcacgccgatgatgtgcgcctacctgctgcgccaccagccgccgcgttcgcagcggcgg
gcgcgcggcttcggtaaaatgctgctggggctgcagcagggctacgggcgctcgctgaac
tgggtgctcggccactcgcgctgggtgctggcggtgttcctcgccaccgttgcgctcaac
gtttggctgtatatcagcatcccgaaaaccttcttcccggaacaggataccgggcgtctg
atgggctttatccaggccgaccaaagcatttcgttccaggcgatgcgcggcaaactggaa
gacttcatgaaaatcgtgcgcgaagatccggacgtggaaaacgtcaccggttttaccggc
ggttcgcgcaccaacagcggttcgatgttcatctcactgaaacccctgtcggtacgcagc
gacgacgcgcagaaagtgatcgcccgcctgcgcgcccgcttggccaaagaaccgggcgcc
agcctgtttctgatggcggtgcaggatatccgcgtcggcggccggcaggccaacgccagc
tatcaatatacgttgctggcggacgatctcgctgcgctgcgcgaatgggagccgaagatc
cgcaccgcactggccgcattgcccgagctggcggacgtcaactcggatcagcaggataaa
ggctcggagatggatctggtctacgatcgcgaaaccatggcgcgcctcggcatttcggtg
tccgacgccaacaacctgttgaacaacgccttcggccagcgacagatttcgaccatctac
caaccgctcaaccaatacaaagtcgtgatggaagtggcgccaccctacacccaggacgtg
agttcgctggacaaaatgttcatcatcaacaacgaaggcaaagcgataccgctctcctac
ttcgccagttggcggccggccaacgcgccgctgtcggtcaaccatcaggggctgtccgcc
gcctcgaccgtctcctttaacctgccggacagcggcagcctgtcggacgccaccgccgcg
gtcgagcgcaccatgactcagctcggcgtgccgtctacggtgcgcggcgcgttcgccggc
accgcccaggtgttccaggacaccctgaagtcgcagctgatcctgatcctggcggcgatc
gccacggtgtatatcgtgctcggcgtgctgtacgagagctatatccatccgctgaccatc
ctttccacgctgccttccgccggcgtgggggcgctgctggcgctcgagctgttcggcgcg
ccgttcagcctgatcgcgctgatcggcatcatgctgttgatcggcatcgtgaagaaaaac
gccatcatgatggtcgacttcgcgctcgaatcgcagcgcaacggcggcatcagcgcccgc
gaggcgattttccaggccagcctgctgcgtttccggccgatcatgatgaccacgctggcg
gcgttgttcggcgcgctgccgctggtgctgacccgcggcgacggcgcggagctgcgccag
ccgctcggcatcaccatcgccggcggcctggtgatgagccaactgctgacgctgtacacc
accccggtggtctacctttacttcgaccggctgcaggcgaagttccgccgcaacaagcaa
ctggctccactgccccattaa
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