Serratia nematodiphila: NLX84_18635
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Entry
NLX84_18635 CDS
T08619
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snem03009
]
NLX84_18635 (der)
Ribosome biogenesis [BR:
snem03009
]
Prokaryotic type
GTPases
NLX84_18635 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
AAA_22
Roc
Ras
ABC_tran
AAA_24
ATP_bind_1
SRPRB
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
UTO00390
LinkDB
All DBs
Position
complement(3916950..3918440)
Genome browser
AA seq
496 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEIEGNEFIIVDTGGI
DGTEDGVETRMAGQSLLAIEEADIVLFMVDARTGLMPADQGIAQHLRSRQKATFLVANKT
DGLDPDTATADFYSLGLGEVFAIAASHGRGVTQLIEHVLVPFVPEKPEDVELTEEEANAA
YWAEQNGETLEGEEDEEPEEAFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMP
GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDA
REGISDQDLSLLGFILNSGRSLVIAVNKWDGMSEEDREHVKEMLDLRLGFVDFARVHFIS
ALHGSGVGNLFESVQEAYECATRRVNTSMLTKIMQMAVDDHQPPLVRGRRVKLKYAHAGG
YNPPIVVIHGNQVSDLADSYKRYLMNYFRRSLNVMGTPIRIQFKEGDNPFAGKRNLLTPT
QMRKRKRLMSHLKKSK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtgggtaaatccaccttgttcaac
cgtttaacccatacgcgtgatgcgctggtggcggatttcccggggctgacgcgtgaccgc
aagtatggtcgtgctgaaatcgaaggcaatgaattcatcatcgtcgataccggcggcatc
gacggcaccgaagacggcgtcgaaacgcgcatggccggtcagtcgctgctggcgatcgaa
gaagcggacatcgtgctgttcatggtcgacgcccgcaccggcctgatgccggcggatcag
ggcattgcccagcacctgcgcagccgccagaaggcgaccttcctggtggccaacaaaacc
gacggtctggatccggacaccgccaccgccgatttctattcgctcggcctgggtgaagtg
ttcgctatcgccgcttctcacggccgcggcgtgacccagctgatcgaacacgtgctggtg
ccgttcgtaccggaaaaaccggaagacgtcgagctgaccgaggaagaggccaacgccgct
tactgggctgagcaaaacggtgaaacgctggaaggcgaagaagacgaagagccggaagaa
gcgttcaatccgcaggatctgccgatcaagctggcgatcgtcggccgcccgaacgtcggt
aagtctacgctcactaaccgcatcctcggcgaggagcgcgtggtggtgtacgacatgccg
ggcaccacccgcgacagcatctacattccgatggtgcgcgacgaacgcgagtacgtgctg
atcgacaccgccggggtgcgcaaacgcggcaaggtgacggaaaccgtcgagaaattctcg
gtgatcaagaccctgcaggcgattgaagacgccaacgtggtgctgctggtgatcgacgcg
cgtgaaggcatttccgatcaggatctctctttgctcggctttatcctcaatagtgggcgc
tcactggtgattgcggtcaacaagtgggacggcatgagcgaagaagatcgcgagcacgtg
aaagagatgctcgatctgcgcctgggcttcgtcgacttcgcgcgcgtgcacttcatttcc
gccctgcacggcagcggcgtcggcaacctgttcgagtcggtacaggaagcctacgagtgc
gcaacccgccgcgtaaacacctcgatgctgaccaaaatcatgcagatggcggttgacgat
caccagccgcctttggtgcgcggccgccgcgtgaagctgaaatatgcccatgccggcggt
tacaacccgccgatcgtggtgatccacggcaaccaggtcagcgatctggccgattcgtat
aaacgctatttgatgaactacttccgccgctcgctgaatgtgatggggacgccgatccgc
atccagttcaaagagggtgacaacccgttcgccggcaaacgcaacctgctgacgccgacc
cagatgcgtaagcgcaagcgcctgatgagccacctgaaaaagagcaagtaa
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