Serratia nematodiphila: NLX84_19835
Help
Entry
NLX84_19835 CDS
T08619
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
snem
Serratia nematodiphila
Pathway
snem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLX84_19835 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snem03400
]
NLX84_19835 (recC)
Enzymes [BR:
snem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLX84_19835 (recC)
DNA repair and recombination proteins [BR:
snem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLX84_19835 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
UTO00609
LinkDB
All DBs
Position
complement(4169521..4172892)
Genome browser
AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKTLTSALIARDPLTDPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANV
AFPLPATFIWDMFTRVLPDIPKESAFSKDAMTWKLMWLLPEMLTQPAFAPLQHYLTDYGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQRGERIGGLAEAQQWQAPLWARLVEYTRELG
QPEWHRANLYSRFIHALEQATTCPPGLPPRVFICGISALPPVYLEALQALGRHIDIHLMF
TNPCRYYWGDIQDYAFLARLQSRKRRHYHQAREQGLFREPADAARLFDAEGQQQLSNPLL
ASWGKLGRDHLYLLSQMEGAQEVDAFVDIPADTMLHAVQRDMLELEDHAVIGITAETLES
SFSKRPLDENDRSLSLHACHSPQREVEVLHDQLLSMLAQDPSLTPRDIIVMVADIDSYTP
YIQAVFGNALAERYLPFAISDRKARQAHPALQAFISLLDLPQSRFTSEQVLALLEVPALA
ARFAIGEEGLRLLRHWVGESGVRWGLDDDNVRELDLPATGQHTWRFGITRMLLGYAMDSN
AGDWQGILPYDESSGLVAELAGQLADLLAQLSHWRQILSEARPLEAWLPLCRQLLDAFFA
ADSDTEVVLALIEQQWQQAINFGLAARYPDEVPLTILRDDLAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQQRLYISFIGRSIQDNSPRYPSVLVTELLEYLEQSYCLPGDEELSADDSARRVGEHL
LKWHARMPFAAENFLPGSEAQSYAAEWLPAADGRGAAHPAFNQPLPAEALQQISLDELLR
FYRHPIRAFFQLRLGVSFILEETELPDEEPFTLDNLSRYQFNSQLLNTLIDGDDPERLFQ
RVRAAGGLPYGAFGEIYWQKQQEEMSELAEQVRAERAESHSLELDIDIAGVRLSGWLHQV
QDDGLLRWRPATLSAVDGILLWLEHLVYCRAGGTGESRIYGRKNSVWRFAALAPEEAQAQ
LAELLAGYQRGLCQPLLLLNKSGWAWLSQCYQPETQQIDWEEEAQIKARAKLLQAWQGDQ
RIPGEGEDPYVQRVFRQLDNEYLAQILAETERYLLPVARHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattccaatcagctggatttgttgaaaacgctgaccagcgcgctg
atagccagagatccgttgaccgatccttttcaacaggaggtggtgctggtgcaaagcccc
ggtatggcgcaatggctgcagatgcagctggcggaacagttcggtatcgccgccaatgtc
gcgtttccgctgccggcgaccttcatttgggacatgttcacccgggtgttgccggatatc
ccgaaagagagcgccttcagcaaggatgccatgacctggaagctgatgtggttgttgccg
gagatgctgactcagccggcgtttgcgccactgcagcactatctgaccgattacggcgac
aagcgcaaaatccaccagttggccggccgggtcgccgacctgttcgaccaatatttggtt
tatcgcccgcagtggctggagagctggcagcgcggcgaacgcatcggcggtctggcggag
gctcagcaatggcaggcgccgctctgggcgcgactggtggaatacacgcgtgaactgggg
cagccggaatggcaccgcgccaatctgtatagccgctttatccacgcgttggaacaggca
acaacgtgtccgcccggtttgccgccgcgggtgtttatctgcggcatctcggcgttgccg
ccggtctatctggaggcgctgcaggcgctggggcggcatatcgatatccacctgatgttc
accaacccttgtcgttattactggggcgacattcaggattacgctttcctggcccgcttg
cagagccgcaagcgccgtcactatcatcaggcgcgcgagcaagggctgtttcgcgaaccg
gccgacgcggcgcgcctgtttgacgccgaagggcagcagcaactcagcaacccgctgctg
gcctcctggggcaagctggggcgcgatcacctttacctgctgtcgcagatggaaggggcg
caagaggtcgacgcctttgtcgatatcccagccgataccatgctgcacgccgttcagcgc
gatatgctggaactggaagaccatgcggtaatcggtattaccgcggaaacgctggaaagc
agcttcagcaaacgtccgcttgatgagaacgaccgctccctcagcctgcacgcttgtcac
agcccgcagcgggaagtggaggttttgcacgatcagctgctgagcatgctggcgcaggat
ccgtcgttgacgccgcgcgacatcatcgtgatggtggcggatatcgacagctacacgcca
tacattcaggcggtgttcggcaatgccctcgccgagcgctacctgccgtttgccatttcc
gaccgtaaagcgcgccaggcgcatccggcgctgcaggcgttcatttcactgctcgatcta
ccgcaaagccgctttacctcggaacaggtactggcgttgctggaggtgccggccctggcc
gcccgtttcgccattggcgaagaggggctgcgcctgctgcgtcattgggtcggtgaatcc
ggcgtgcgctggggcctggacgatgataacgtgcgcgaactggatctgcccgccaccggc
cagcacacctggcgcttcggcattacgcgcatgctgcttggctatgcgatggacagcaat
gccggcgattggcagggcattttgccttacgacgaatcgagcgggttggtcgccgaactg
gcggggcaactggcagacctgctggcgcagctcagccactggcggcaaatcttgagcgaa
gcgcgcccgctcgaggcgtggctgccgctgtgccgccaactgctggatgccttcttcgca
gcggacagcgacaccgaagtggtgctggcgctgatcgaacagcagtggcagcaggccatt
aattttggcttggcggcgcgctatcccgatgaggtgccgttgaccattctgcgtgacgat
ctggcggcgcgcctcgatcaggagcgcatcagccagcgcttcctcgccgggcaaatcaac
ttctgcacgctgatgccgatgcgttccattccgttcaaggtggtgtgcctgctgggcatg
aacgacggcgtgtatccgcgcacgctgccgccgctgggctttgatctgatggcgcagcag
gtcaaacgcggcgaccgcagccgccgcgatgacgaccgctatctgttcctggaagcgatt
ttgtccgctcagcagcggctgtatatcagcttcatcggccgttccattcaggacaacagc
ccgcgctacccttcggtgctggtcactgagctgcttgagtacctggagcaaagctattgc
ctgccaggagatgaggaactcagcgcagacgacagcgcccgacgggttggtgagcacttg
ctgaagtggcatgcgcgcatgccgttcgccgccgagaatttcttgccgggctcggaggcg
caaagctatgctgccgagtggctgcccgccgccgatggtcgcggtgcggcgcatccggcg
ttcaaccagccgctgcctgccgaagcgctgcagcaaatatcgttggatgagctgctgcgg
ttttaccgccatccgattcgcgcgtttttccaattgcggctgggcgtcagttttatcctg
gaagagaccgagctgccggacgaagagcccttcacgctggataacctcagccgctaccag
tttaacagccaactgctgaataccctgatcgacggcgacgatcccgaacggttgttccag
cgggtgcgtgccgccggcggcttgccctatggcgccttcggcgagatctattggcaaaag
cagcaggaagagatgagcgagctggccgaacaggtgcgtgcggaacgcgcagagagccat
agcctggagctggatatcgatattgccggcgtacgtctcagtggctggctgcatcaggtg
caggatgacggcctgttgcgctggcggcccgctacgctgtcggcggtggacggcatattg
ctgtggctggagcatctggtgtactgccgcgccggcggcaccggcgagagccgcatctac
ggccgcaagaactccgtctggcgctttgccgcgctggcgcctgaagaggcgcaggcgcag
ctggcggagctgttggcgggctatcagcgcggtctgtgtcagccgctgctgttgctgaac
aaaagcggctgggcgtggctgagtcagtgctatcagccggaaacgcagcaaatcgactgg
gaggaagaagcgcaaattaaggcacgcgccaaattgctgcaggcctggcagggcgatcag
cgcattcccggagaaggggaagatccctacgtgcagcgagtgttccgccaattggataat
gaatacttagcgcaaatactggccgaaacagagcgttatctgctgccggtagcgcgacat
aacctggggtaa
DBGET
integrated database retrieval system
