Serratia nematodiphila: NLX84_19875
Help
Entry
NLX84_19875 CDS
T08619
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
snem
Serratia nematodiphila
Pathway
snem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLX84_19875 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snem03019
]
NLX84_19875 (rppH)
Messenger RNA biogenesis [BR:
snem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NLX84_19875 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UTO00617
LinkDB
All DBs
Position
complement(4179118..4179645)
Genome browser
AA seq
175 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLLCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAVTVMPMQEQAAPRQAPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtcagggg
caggtcttatgggcccgccgttacggtcagcactcctggcagtttccccaaggtgggatt
aaccctggcgaaactgcggagcaggcgatgtaccgtgagctgttcgaagaagtggggctg
agtaaaaaggatgtgcgcatcctggcttcgacccgcaactggttgcgctataaattgccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccaaaagcaaaaatggttt
ttgttgcagctactgtgcaatgacgctgatatcaatatgcagcgcagcagcacgccggag
ttcgacggttggcgctgggtgagcttctggtatccggtgcgccaggtggtgtcgttcaaa
cgcgacgtctaccgccgggtgatgaaagaattcgccgtgaccgtgatgccgatgcaagag
caggcggcgccgcggcaggctcccgcttatcgccgaaagagaggttaa
DBGET
integrated database retrieval system
