Serratia nematodiphila: NLX84_19930
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Entry
NLX84_19930 CDS
T08619
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snem
Serratia nematodiphila
Pathway
snem00300
Lysine biosynthesis
snem00470
D-Amino acid metabolism
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01120
Microbial metabolism in diverse environments
snem01230
Biosynthesis of amino acids
Module
snem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLX84_19930 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLX84_19930 (lysA)
Enzymes [BR:
snem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NLX84_19930 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UTO00628
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Position
complement(4191511..4192773)
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AA seq
420 aa
AA seq
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MPRPLHDTSTALNAANLLALPQRFGCPVWAYDADIISQRIAQLRHFDTIRFAQKACSNIH
ILRLMREQGVKVDSVSLGEIERALQAGFQPGGEPSEIVFTADVLDHATLARVSELKIPVN
AGSIDMLDQLGQVSAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIRR
YGLQLIGVHMHIGSGVDYQHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAID
TEHYFGLWNRARERIAAHLGHPVQLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDA
GFNDLMRPAMYGSYHHISLLPADGRDTSGQALRETVIAGPLCESGDVFTQQAGGGVETRE
LPPVQIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTIEELIALELI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcccgttgcacgacacctccaccgcgttgaacgccgctaatctgctggccttg
ccgcagcgtttcggttgcccggtctgggcctatgatgcggacatcatcagccagcgcatc
gctcagctgcgccacttcgacaccattcgtttcgcgcagaaggcctgttcgaacattcat
attttgcgcttgatgcgcgagcagggcgtgaaggtggattcggtgtcgctgggcgagatc
gaacgggcgctgcaggccggttttcagccaggaggcgaaccgagcgagatcgtgtttacc
gcggatgtgttggatcacgccacgctggcgcgcgtcagcgaattgaagatcccggttaac
gccggttccatcgacatgctggatcagctcggccaggtttccgcagggcatccggtgtgg
ctgcgcattaacccggggtttggccacggccacagccagaaaaccaacaccggcggcgag
aacagcaagcacggcatctggtatgccgacctgccgcaggcggtggagaaaattcgccgc
tatggcctgcaactgatcggcgtgcatatgcacatcggttccggggtcgattatcagcat
ctggagcgggtctgcgatgcgatggtgcagcaagtgatcgatctcggtcatgacatcagc
gccatttccgccggcggcggcctgtctatcccgtatcagtacggcgaagaggcgatcgat
accgaacactatttcggtttgtggaatcgggcgcgtgaacgcatcgccgcgcatctgggg
catccggtgcagttggagattgaacccgggcgtttcctgatggcggaagcgggcgtcttg
gtggccgaagtgcgggcggtaaaagacatgggcagccgccacttcgtgctggtggacgcc
ggttttaacgatctgatgcgcccggcgatgtacggcagctatcaccatatttcgctgttg
ccggccgatgggcgcgatacttcggggcaagcgctgcgcgaaacggtgatcgccgggccg
ctgtgcgaatccggcgacgtgttcacccagcaggcgggcggcggcgtggaaacccgcgaa
ctgccgccggtgcagatcggcgattatctggtgttccacgacaccggcgcctacggcgca
tcgatgtcctccaactacaacagccgtccgctgttgcctgaagtactgttcgaaaacggc
gagccgcgtttgatccgccgccgccaaaccatcgaagaactgatcgcgctggaacttatc
tga
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