Serratia nematodiphila: NLX84_20890
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Entry
NLX84_20890 CDS
T08619
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
snem
Serratia nematodiphila
Pathway
snem00010
Glycolysis / Gluconeogenesis
snem00020
Citrate cycle (TCA cycle)
snem00260
Glycine, serine and threonine metabolism
snem00280
Valine, leucine and isoleucine degradation
snem00310
Lysine degradation
snem00380
Tryptophan metabolism
snem00620
Pyruvate metabolism
snem00630
Glyoxylate and dicarboxylate metabolism
snem00640
Propanoate metabolism
snem00670
One carbon pool by folate
snem00785
Lipoic acid metabolism
snem01100
Metabolic pathways
snem01110
Biosynthesis of secondary metabolites
snem01120
Microbial metabolism in diverse environments
snem01200
Carbon metabolism
snem01210
2-Oxocarboxylic acid metabolism
snem01240
Biosynthesis of cofactors
Module
snem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snem_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
snem_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NLX84_20890 (lpdA)
00020 Citrate cycle (TCA cycle)
NLX84_20890 (lpdA)
00620 Pyruvate metabolism
NLX84_20890 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
NLX84_20890 (lpdA)
00640 Propanoate metabolism
NLX84_20890 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NLX84_20890 (lpdA)
00280 Valine, leucine and isoleucine degradation
NLX84_20890 (lpdA)
00310 Lysine degradation
NLX84_20890 (lpdA)
00380 Tryptophan metabolism
NLX84_20890 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NLX84_20890 (lpdA)
00670 One carbon pool by folate
NLX84_20890 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snem04147
]
NLX84_20890 (lpdA)
Enzymes [BR:
snem01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NLX84_20890 (lpdA)
Exosome [BR:
snem04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NLX84_20890 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UTO00803
LinkDB
All DBs
Position
complement(4394642..4396066)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGVEVDERGFINVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggttactct
gcagcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccact
ctgggcggggtttgcctgaacgtgggatgtatcccttccaaagcactgctgcacgttgcc
aaagtgatcgaagaagccaaagcgctggccgaacacggcatcgttttcggcgagccgaaa
accgacatcgacaaagtgcgcgtctggaaagaaaaagtcatcacacagctgaccggcggt
ctggctggcatggccaaaggccgtaaagtgaaagtggtcaacggcctgggcaagttcacc
ggcgctaacaccctggttgtggaaggcgaaaacggcccaaccaccatcaacttcgacaac
gccatcatcgccgcaggttctcgtccgatccaactgccattcattcctcatgaagatcca
cgcgtgtgggattctaccgatgcgctggaactgaaaaccgtcccagagcgtctgctggtt
atgggcggcggcatcatcggcctggaaatgggcaccgtataccatgcgctgggttcacag
atcgacgtcgttgaaatgttcgatcaggttatcccggcggcagataaagacgtggtgaaa
gtcttcaccaaacgtatcagcaagcagttcaacctgatgctggaaaccaaagtgaccgcg
gtagaagccaaagaagacggcatctacgtcacgatggaaggtaaaaaagcgccggcagaa
ccacagcgttacgacgcggtgctggtggcgatcggccgcgtgccgaatggcaaactgctg
gatgccggcaaagccggtgttgaagttgacgagcgtggcttcatcaacgtcgacaaacag
ctgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtcggtcagccgatgctg
gcgcacaaaggcgtgcacgaaggccacgtcgccgcagaagttatcgccggcatgaagcac
tacttcgatccgaaagtgatcccatccatcgcttacaccgagccggaagtggcgtgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaacctccaccttcccg
tgggcggcttccggccgtgcgatcgcttccgactgtgcagacggcatgaccaaactgatc
ttcgacaaagaaactcaccgcatcatcggtggcgcgattgtcggcaccaacggcggcgag
ctgctgggtgaaatcggtctggctatcgagatgggctgcgacgcggaagacatcgcgctg
accatccacgctcatccgaccctgcacgaatccgtgggcctggcggcggaaatctacgaa
ggcagcatcaccgatctgcctaacccgaaagccaagaagaagtaa
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