KEGG   Serratia nematodiphila: NLX84_20890
Entry
NLX84_20890       CDS       T08619                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
snem  Serratia nematodiphila
Pathway
snem00010  Glycolysis / Gluconeogenesis
snem00020  Citrate cycle (TCA cycle)
snem00260  Glycine, serine and threonine metabolism
snem00280  Valine, leucine and isoleucine degradation
snem00310  Lysine degradation
snem00380  Tryptophan metabolism
snem00620  Pyruvate metabolism
snem00630  Glyoxylate and dicarboxylate metabolism
snem00640  Propanoate metabolism
snem00670  One carbon pool by folate
snem00785  Lipoic acid metabolism
snem01100  Metabolic pathways
snem01110  Biosynthesis of secondary metabolites
snem01120  Microbial metabolism in diverse environments
snem01200  Carbon metabolism
snem01210  2-Oxocarboxylic acid metabolism
snem01240  Biosynthesis of cofactors
Module
snem_M00009  Citrate cycle (TCA cycle, Krebs cycle)
snem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
snem_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:snem00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NLX84_20890 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NLX84_20890 (lpdA)
   00620 Pyruvate metabolism
    NLX84_20890 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NLX84_20890 (lpdA)
   00640 Propanoate metabolism
    NLX84_20890 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NLX84_20890 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NLX84_20890 (lpdA)
   00310 Lysine degradation
    NLX84_20890 (lpdA)
   00380 Tryptophan metabolism
    NLX84_20890 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NLX84_20890 (lpdA)
   00670 One carbon pool by folate
    NLX84_20890 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snem04147]
    NLX84_20890 (lpdA)
Enzymes [BR:snem01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NLX84_20890 (lpdA)
Exosome [BR:snem04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NLX84_20890 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: UTO00803
LinkDB
Position
complement(4394642..4396066)
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGVEVDERGFINVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggttactct
gcagcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccact
ctgggcggggtttgcctgaacgtgggatgtatcccttccaaagcactgctgcacgttgcc
aaagtgatcgaagaagccaaagcgctggccgaacacggcatcgttttcggcgagccgaaa
accgacatcgacaaagtgcgcgtctggaaagaaaaagtcatcacacagctgaccggcggt
ctggctggcatggccaaaggccgtaaagtgaaagtggtcaacggcctgggcaagttcacc
ggcgctaacaccctggttgtggaaggcgaaaacggcccaaccaccatcaacttcgacaac
gccatcatcgccgcaggttctcgtccgatccaactgccattcattcctcatgaagatcca
cgcgtgtgggattctaccgatgcgctggaactgaaaaccgtcccagagcgtctgctggtt
atgggcggcggcatcatcggcctggaaatgggcaccgtataccatgcgctgggttcacag
atcgacgtcgttgaaatgttcgatcaggttatcccggcggcagataaagacgtggtgaaa
gtcttcaccaaacgtatcagcaagcagttcaacctgatgctggaaaccaaagtgaccgcg
gtagaagccaaagaagacggcatctacgtcacgatggaaggtaaaaaagcgccggcagaa
ccacagcgttacgacgcggtgctggtggcgatcggccgcgtgccgaatggcaaactgctg
gatgccggcaaagccggtgttgaagttgacgagcgtggcttcatcaacgtcgacaaacag
ctgcgcaccaacgtgccgcacatcttcgccatcggcgacatcgtcggtcagccgatgctg
gcgcacaaaggcgtgcacgaaggccacgtcgccgcagaagttatcgccggcatgaagcac
tacttcgatccgaaagtgatcccatccatcgcttacaccgagccggaagtggcgtgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaacctccaccttcccg
tgggcggcttccggccgtgcgatcgcttccgactgtgcagacggcatgaccaaactgatc
ttcgacaaagaaactcaccgcatcatcggtggcgcgattgtcggcaccaacggcggcgag
ctgctgggtgaaatcggtctggctatcgagatgggctgcgacgcggaagacatcgcgctg
accatccacgctcatccgaccctgcacgaatccgtgggcctggcggcggaaatctacgaa
ggcagcatcaccgatctgcctaacccgaaagccaagaagaagtaa

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