Serratia nematodiphila: NLX84_21610
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Entry
NLX84_21610 CDS
T08619
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_21610
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NLX84_21610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_Crp_2
MarR
HTH_11
MarR_2
Rrf2
DUF2259
RepL
NQRA_SLBB
HTH_41
Motif
Other DBs
NCBI-ProteinID:
UTO00935
LinkDB
All DBs
Position
complement(4543860..4544594)
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AA seq
244 aa
AA seq
DB search
MTDFMAWLRGHLAQGAVAPRYIQLATAIETAIRQQVLAAEAFLPPERQMAEGLALSRVIV
SKAMKLLEEKGLISRQQGVGTRVAMRIGYSLDKDSGFTAQALRHGSRVSNRWLLRTRVGA
PAKAAAALGLAEGDEVIKLRRLRLLNGSPVSLETTYIPPRFLPEPAQLEHSLYALWQSRG
IVPEDKHFLLKAVSCSDEVAELLNVPCGAPLLHIIQTSRNAQGEALEFSDILCRSDVYEF
EVNG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgacggattttatggcctggctgcgtggccatctggcccagggggcggtagcgccgcgt
tatattcagctggcgacggcgatagaaactgcgatcaggcagcaggtgttggcggcggag
gcatttctgccgccggaacggcagatggcggaaggtttggcgctgtcgcgcgtcatcgtc
agcaaggcgatgaagctgctggaggagaaggggctgatttcgcggcagcagggcgttggc
acccgcgtggcgatgcgcatcggctattccctcgataaggacagcgggtttaccgctcag
gcgctgcgtcatggcagccgcgtcagcaatcgatggttgctgcgcacccgagtcggcgcg
ccggccaaggccgcggcggcgttggggctggcggagggggatgaagtgatcaaactgcgg
cggttacgcttgctgaacggcagcccggtctcgctggaaactacctatataccaccgcgc
ttcttgcccgaaccggcgcagctggaacactcgctgtatgcgttatggcaatcgcgcggc
atcgtgccggaggataaacactttctgttgaaggcggtgtcctgcagcgacgaggtcgcc
gaactgctcaacgtgccgtgcggcgcgccgttgttgcacatcatccaaaccagccgcaac
gctcagggtgaggcgctggagttcagcgatatcttgtgccgcagcgacgtttatgaattc
gaagtgaacggttag
DBGET
integrated database retrieval system
