Serratia nematodiphila: NLX84_22215
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Entry
NLX84_22215 CDS
T08619
Name
(GenBank) DgaE family pyridoxal phosphate-dependent ammonia lyase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
snem
Serratia nematodiphila
Pathway
snem00450
Selenocompound metabolism
snem00970
Aminoacyl-tRNA biosynthesis
snem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NLX84_22215
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NLX84_22215
Enzymes [BR:
snem01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
NLX84_22215
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Motif
Pfam:
SelA
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
KELAA
Motif
Other DBs
NCBI-ProteinID:
UTO01042
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Position
complement(4668959..4670077)
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AA seq
372 aa
AA seq
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MSSIYEKYGLKQVINTSGRMTILGVSTPRQDVIDAVDYGLNHYFEIKDLVNKTGAYIADL
LNVEDAVIVSCASAGIAQSVAAVIVKDNANLLVNLHSAPIAVPREIVLPRGHNVNFGAPV
DTMVALGGGKVVEAGYANECSPEQIEACITPQTAAILYVKSHHCVQKSILSVEQAAVVAR
KHNLPLIVDAAAEEDLMCYYQMGADLVIYSGAKAIEGPTSGLVIGKKRYVEWVKLQSGGI
GRAMKVGKEGILGLTQAIESYLTLEKTTGQQMVERMTPFLNSLNTLTGVSAKTVWDSAGR
DIARAEITFDEAVLGRSTYDIVQALKTGDIAIYFRGYKANEGKIEVDVRSVDEQQLMTVF
SCIKNLFTEKQA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgatttatgaaaaatacggtttgaagcaggtgatcaacacctccggccgcatg
accattctcggcgtttccacgccgcgccaggacgtgatcgacgccgttgattacggcctg
aaccactatttcgaaatcaaggatctggtcaacaagaccggcgcctacatcgccgatctg
ctcaacgtggaggacgcggtgatcgtttcctgcgcttcggcggggatcgcccagtcagtg
gcggcggtgatcgttaaagataacgccaatctgctggtgaacctgcactcggcgccgatc
gccgtgccgcgcgagatcgtgctgccgcgcggccacaacgtcaacttcggcgcgccggtg
gacaccatggtggcgctgggcggcggcaaggtagtggaggcgggctacgccaacgaatgt
tcgccggagcagattgaagcctgcatcacgccgcagacggcggcgatcctgtacgtcaaa
tcgcaccactgcgtgcagaaaagcattctgtccgtcgaacaggcggcggtggtggcgcgt
aaacataacctgccgctgatcgtcgacgccgcggcggaagaagatctgatgtgttactac
cagatgggggccgatctggtgatctacagcggtgccaaagccatcgaggggccgaccagc
ggcctggttatcggcaagaaacggtacgtcgaatgggtgaagctgcagtccggcggcatc
ggccgggcgatgaaggtcggcaaagagggcatcctcggcctgacgcaggcaattgaaagc
tatctgacgcttgagaaaaccaccgggcaacagatggtggagcggatgacgccgttcctc
aacagcctcaacaccctgaccggcgtcagcgccaaaaccgtctgggacagcgccggccgc
gatatcgcccgcgccgagatcactttcgacgaagcggtgctggggcggtcgacctatgac
atcgtccaggcgctgaaaaccggcgacatcgccatctacttccgcggctacaaggccaac
gaaggcaagattgaggtcgacgtgcgcagcgtcgacgagcaacagctgatgaccgtcttt
agctgtatcaaaaacctgtttacggagaaacaagcatga
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