Serratia nematodiphila: NLX84_22620
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Entry
NLX84_22620 CDS
T08619
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
snem
Serratia nematodiphila
Pathway
snem03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLX84_22620 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snem03032
]
NLX84_22620 (dnaB)
Enzymes [BR:
snem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NLX84_22620 (dnaB)
DNA replication proteins [BR:
snem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NLX84_22620 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
divDNAB
AAA_33
nSTAND3
CbiA
Motif
Other DBs
NCBI-ProteinID:
UTO01114
LinkDB
All DBs
Position
complement(4751887..4753311)
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AA seq
474 aa
AA seq
DB search
MAGKKPTNKTNADETRERSRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVAERVVA
NDFFSRPHRLIFSEMQRLLEMSKPIDLITLSESLEQKGELDSVGGFAYLAELSKNTPSAA
NIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDE
GPKGIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGMQKSDLIIVAARPSMGK
TTFAMNLCENAAMTQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARI
SSTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPALSDNR
TLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMF
IYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaaaaccaaccaacaaaacaaacgcggacgaaaccagagagcgttccaga
gatcgtcagatggaagggctgaagatgccgccgcactcgctggaggccgagcagtcggtg
ttgggcggtttgatgctggataacgagcgttgggacaacgtggcggagcgcgtggtcgcc
aacgacttcttcagccgcccgcatcgcctgatcttttccgagatgcagcgtctgctggag
atgagcaagcctatcgatctcatcaccctgtctgaatcgctcgaacagaagggcgagctg
gactcggtcggcggctttgcctacctggccgagctgtcgaaaaataccccgagcgccgcc
aacatcggcgcctatgccgacatcgtgcgcgagcgcgcggtggtgcgcgaaatgatctcg
gtggctaacgagatcgccgacgccggctacgatccgcaggggcgcagcagcgaagacctg
ctcgatctggcggaatcccgcgtattccaaatcgccgagaaccgcgccagcaaagacgaa
ggcccgaagggcatcgagcgcatcctggaagacaccgtatcgcgcatcgagcagctgtat
cagcagccgcacgacggcgtgaccggggtcgataccggctatcaggacctcaacaagaaa
accgcgggcatgcaaaagtccgatctgatcatcgtcgccgcccgtccatcgatggggaaa
accaccttcgccatgaacctgtgcgaaaacgccgcgatgactcaggaaaaaccggtgctg
atcttcagcctggagatgcccggcgaacagatcatgatgcgtatgctggcgtcgctgtcg
cgcgtggatcagactcgcatccgtaccggccagctcgatgacgaggactgggcgcgcatt
tccagcaccatgggcatcctgctggagaagcgcaacatgtacatcgacgactcctctggc
ctgacgccgaccgaagtgcgctcgcgcgcgcggcgcattttccgcgagcacgacgggctt
agcctgatcatgatcgactacctgcagctgatgcgcgtgccggccctgtccgacaaccgt
acgctggagatcgccgagatttcgcgctcgctgaaggcgctggcgaaagagctgcaggtg
ccggtggtggcgctgtcgcagctgaaccgcagcctggagcagcgcgccgacaaacgcccg
gtcaactccgacctgcgtgaatccggctctatcgagcaggatgccgacctgattatgttc
atctatcgtgatgaggtgtatcacgagaacagcgatctgaaagggatcgcggaaattatt
atcggtaagcagcgtaacggcccgatcggcaccgtgcgccttacctttaacggccagtgg
tcgcgtttcgataactacgcggggccacaatacgatgacgaataa
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