Serratia nematodiphila: NLX84_22840
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Entry
NLX84_22840 CDS
T08619
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
snem
Serratia nematodiphila
Pathway
snem00030
Pentose phosphate pathway
snem01100
Metabolic pathways
snem01120
Microbial metabolism in diverse environments
snem01200
Carbon metabolism
Module
snem_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
NLX84_22840 (edd)
Enzymes [BR:
snem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
NLX84_22840 (edd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
UTO01155
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Position
4808449..4810263
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AA seq
604 aa
AA seq
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MINPTLSRVTQRIIDRSQASRAAYLARIEAARSQTVHRAQLACGNLAHGFAACQPDDKAS
LKNMVRSDIAIITAYNDMLSAHQPYEHYPQRLKQALKAVGAVGQVAGGVPAMCDGVTQGQ
DGMELSLMSRDVIAMSAAVGLSHNMFDGALFLGICDKIVPGLVMAALSFGHLPALFVPAG
PMSSGLPNKEKVRVRQLYAEGKADRLALLEAEAASYHGIGTCTFYGTANTNQMVMEVMGL
HLPGASFVHPDTPLRDALNDAAARQVTRLTDTAGNYLPIGRLVDEKVVVNGIVSLLATGG
STNLTMHLVAMARAAGIIITWDDFSELSEAVPLLCRIYPNGPADINQFQAAGGVPLVVRE
LLQHGLLHEDVHTVAGFGLRRYTQEPWLDNGQLVWREGVAGSLDASVIASVAQPFEHHGG
TKVMAGNLGRAVMKTSAVPADNQIIEAPAVVFDSQHDIVPAFEAGKLDRDCVVVVRFQGP
QANGMPELHKLMPPLGVLMDRGFKVALVTDGRLSGASGKVPSAIHVTPEAYTGGLLAKVR
DGDPIRVNGRSGELQVLVDADELARRTPCQPDLSAEHIGCGRELFGALRSQLSGAEQGAC
CIKF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgattaatccaaccttgtcccgtgtcacacagcgcatcatcgaccgttcccaggccagc
cgcgccgcctatctggcgcgtatcgaggcggcccgctcccaaaccgtccaccgcgcgcag
ctcgcctgcggcaacctggcccacggtttcgccgcctgtcagcccgatgacaaggcgtcg
ctgaaaaacatggtgcgcagcgatatcgccatcatcaccgcctacaacgacatgctatcg
gcccaccagccgtacgaacattacccacagcggctgaaacaggcgctgaaggcggtgggc
gccgtgggccaggtggccggcggcgtgccggcgatgtgcgacggcgtgacgcaggggcag
gacggcatggagctgtcgctgatgagccgtgacgtgatcgccatgtcggccgccgtcggc
ctgtcgcacaatatgttcgacggcgcgctgttcctcggcatctgcgacaagatcgtgccg
gggctggtgatggccgccctctccttcggccacctgcctgcgctgttcgtgccggccggc
ccgatgagcagcggcctgccgaacaaggaaaaagtgcgcgtgcgccagctgtacgccgag
ggcaaagccgaccgtttggcgttgctggaagccgaggctgcctcttatcacggcatcggc
acctgcaccttctacggcaccgccaacaccaaccagatggtgatggaagtgatgggtttg
catctgccgggcgcctccttcgtccatcctgacacgccgctgcgcgatgcgctgaacgac
gccgccgcgcgccaggtgacccgactgaccgacaccgccggcaactacctgccgatcggc
cgcctggtggacgagaaagtggtggtgaacggcatcgtctcgctgctggcgaccggcggc
tcaaccaacctgaccatgcatctggtggcgatggcacgcgcggcgggcatcatcattacc
tgggacgatttctcggagctgtcggaggcggtgccgctgctgtgccgcatctatccgaac
ggcccggccgacatcaaccagttccaggccgccggcggcgtgccgctggtggtgcgcgag
ctgctgcaacacggcctgctgcacgaagacgtgcataccgtggccggtttcggcctgcgc
cgctacacccaggaaccgtggctggataacggccaactggtgtggcgcgaaggcgtggcc
ggctcgctcgacgccagcgtgatcgccagcgtggcccagccgttcgaacatcacggcggc
accaaagtgatggccggcaatctgggccgcgcggtgatgaaaacctcggcggtgcccgcc
gataaccagatcatcgaagcgccggcggtggtgttcgacagccagcacgatatcgtgccg
gcgttcgaagccggcaagctggatcgcgattgcgtggtggtggtgcgcttccaggggccg
caggccaacggcatgcccgagttgcacaagctgatgccgccgctgggtgtgctgatggat
cgcggcttcaaagtggcgctggtgaccgacggccgcctgtccggcgcctccggcaaggtg
ccttccgccattcacgtcaccccggaagcctataccggcggcctgctggcgaaagtgcgc
gacggcgatccgatccgcgtcaacggccgcagcggcgaactgcaggtgctggtcgacgcc
gacgagttggcgcggcgcacgccatgccaacccgatctgagcgcggaacacatcggctgc
gggcgcgagctgttcggcgcgctgcgcagccagctgtcaggcgccgagcagggcgcctgc
tgcatcaaattttaa
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