Serratia nematodiphila: NLX84_23495
Help
Entry
NLX84_23495 CDS
T08619
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NLX84_23495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
S1
HHH_9
HHH_7
YqgF
S1_RRP5
T2SSK
Spt6_S1
HHH_6
Motif
Other DBs
NCBI-ProteinID:
UTO01276
LinkDB
All DBs
Position
4922663..4924996
Genome browser
AA seq
777 aa
AA seq
DB search
MNDPLSRIIATELQARPEQVDSAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLG
YLRELEDRRQTILKSIDEQGKLTEQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADTLWQDPQQQPEQLAERYVDADKGVADVKAALDGARYILMERFAEDAALLAKVR
DYLWKNAHLVSKVVEGKEEEGAKFRDYFDHHEPISQVPSHRALAMFRGRNEGVLQLALNA
DPQFEEAPRESQAELIIINHLNLRLNNAPADAWRKAVVNWTWRIKVLLHLETELMGTVRE
RAEDEAINVFARNMHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHT
GQAAKAAAIVAALCIKHNVELVAIGNGTASRETERFYLDLQKQFGDVRAQKVIVSEAGAS
VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDSVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVNWRDENGRFSNREQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVQRILAATEQALQDLMGNASAVRSLK
AVDFTDDKFGVPTVTDILKELEKPGRDPRPEFKTATFAEGVETLNDLQPGMILEGSVTNV
TNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVMEVDLQRKRIALSMRL
DEQPGEGSPRRGGNAPAQTRDNANRSAGGNKAKPRNAAPAGNSAMGDALAAAFGKKR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccactgagccgcattattgcaacagaactgcaggcccggccggagcaagtc
gactccgccatccgtctgctggatgaaggtaataccgtgccctttattgcacgctatcgt
aaggaagtcaccgggggcctggacgacacccaactgcgccagctggaaacccgcctgggt
tatctgcgtgaactggaagatcgtcgccagaccatcctgaagtcgatcgatgaacagggc
aaactgactgaacaattggcgggggcgatcaacgccacgctgagcaagaccgaactcgaa
gacctctacctgccgtacaaaccgaagcgccgcacccgtggccagatcgccatcgaagcc
ggcctggaaccgctggcggatacgctgtggcaggatccgcaacagcagccggaacaactg
gctgaacgctacgtcgacgccgacaagggcgtggcggacgtgaaagccgccctcgacggc
gcgcgctatatcctgatggagcgcttcgccgaagacgccgctctgctggccaaggtgcgc
gactacctgtggaaaaacgcccatctggtgtccaaagtggtcgaaggcaaggaagaagaa
ggcgccaagttccgcgactattttgatcaccacgaaccgatttctcaggtgccttcacac
cgcgcgctggcgatgttccgcggccgcaacgaaggcgtgctgcagctggcgctgaacgcc
gatccgcagtttgaggaagcgccgcgcgaaagccaggcggagctgatcatcatcaatcac
ctcaacctgcgcctgaacaacgccccggccgacgcctggcgcaaggcggtggttaactgg
acctggcgcatcaaggtgttgctgcacctggaaaccgagctgatgggcacggtgcgcgag
cgcgcggaagatgaagcaatcaacgttttcgcccgcaacatgcatgatctgctgatggcc
gcgccggccggcatgcgcgccaccatgggcctcgatccgggcctgcgcaccggggtgaaa
gtcgccgtggtcgacgcgaccggcaaactggtcgccaccgacaccgtctacccgcacacc
gggcaagcggcgaaagccgccgccatcgtcgcggcgctgtgcatcaaacacaacgtggag
ctggtggccatcggcaacggcaccgcttcacgtgaaaccgagcgcttctatctcgacctg
caaaagcagttcggcgacgtccgggcgcaaaaagtgatcgtcagcgaagcgggcgcgtcg
gtgtattccgcgtctgaactggcggcgcaggaattcccggatctcgacgtatcgctgcgc
ggcgcggtgtccatcgctcgccgcctgcaggatccgctggcggagctggtgaagatcgac
ccgaaatccatcggcgtcggccagtatcagcacgacgtcagccagagccagctggcgaag
aaactggactcggtggtggaagactgcgtaaacgccgtcggcgtcgatctgaacaccgcg
tcggtgccgttgctgacccgcgtggccggcctgacgcgcatgatggcgcagaacatcgtc
aactggcgcgacgagaacggccgcttcagcaaccgtgaacagctgctgaaggtcagccgt
ctggggccgaaggccttcgaacagtgcgccggcttcctgcgtatcaaccacggcgacaac
ccgctggatgcttctaccgttcacccggaagcctatccggtggtgcaacgcatcctggcc
gccaccgagcaggcgctgcaggatctgatgggcaacgcctccgcagtgcgcagcctgaaa
gcggttgatttcaccgacgacaagttcggcgtgccgacggtcaccgacattctgaaagag
ctggagaagccgggccgcgatccgcgtccggagttcaaaaccgccaccttcgccgaaggc
gtggaaaccctcaacgatctgcagccgggcatgatcctggaaggctcggtgaccaacgtc
accaacttcggcgccttcgtggatatcggcgtgcatcaggacggcctggtgcacatctcc
tcgctggcggacaaattcgtcgaagatccgcacaccgtggtgaaggccggcgacatcgtc
aaagtgaaggtgatggaagtcgatctgcagcgtaaacgcattgcgctgagcatgcgcctg
gatgagcaaccgggcgagggttcaccgcgtcgcggcggcaacgcgcctgcccagacgcgc
gacaacgccaaccgttcggcaggcggcaacaaggccaaaccgcgcaacgcggcgccggcc
ggcaacagcgccatgggcgacgcgctggcggcggcattcggcaagaaacgctaa
DBGET
integrated database retrieval system
