Serratia nematodiphila: NLX84_23835
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Entry
NLX84_23835 CDS
T08619
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K16326
CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_23835
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NLX84_23835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HemN_C
GntR
HTH_24
DUF4423
HTH_28
wHTH-PRTase_assc
HTH_36
HTH_8
HTH_23
HTH_29
MarR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UTO01339
LinkDB
All DBs
Position
complement(5007273..5007956)
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AA seq
227 aa
AA seq
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MKTVGDSKLKEAFIGAHDLRTALSPTLLAALRLVSVEAGEYLVTQSDRLTHLFFLVQGKL
QVENFDVNGAHIVFSFETDFSVIGDLELFSQAQRTLFSTVQAVTDALLLAAPIEAINNHA
LSDPAFLTFICRQLSNKLLNASLLHANGVFTAEYKLRKFLLFKIKNEGELIELENREALA
ARLGISVRQLSRALAQLAADGIIQFKNKSLRVTDRQRLSDINGSARI
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacggtcggtgacagcaagctaaaagaagcttttatcggcgctcacgatctgcga
acggcgctttcgcccacgctgctcgccgcactgcgcctggtcagcgtcgaagccggcgaa
tacctggtgacgcaaagcgatcgtttgacccacctgttttttctcgtacagggaaaattg
caggttgagaattttgatgtgaatggcgcgcacattgtcttttccttcgaaacggatttc
tcggtgattggcgatctggaactgttttcccaggcgcagcgcacgctgttcagcaccgtg
caggcggtgaccgacgcgctgctcctcgcggcaccgatagaggccatcaacaatcacgcc
ctgagcgacccggcgttcctcacctttatctgccggcaattgagcaataagctgctgaat
gcctctttgctgcatgcgaacggcgtttttacggcggagtataaactgcgaaaattttta
ttattcaagataaagaacgaaggggaattgattgagctggaaaaccgggaggcgctggcg
gcgagattgggcatctccgtcagacagctgagccgcgcgctggcgcagctcgcggcggac
ggcatcattcaattcaaaaacaaatcactgcgggtgacggatcgccaacggctgtccgac
atcaacgggagcgccaggatctag
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