Serratia nematodiphila: NLX84_24275
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Entry
NLX84_24275 CDS
T08619
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snem03000
]
NLX84_24275 (cytR)
Transcription factors [BR:
snem03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NLX84_24275 (cytR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MarR_2
HTH_Crp_2
HTH_3
Sigma54_DBD
TetR_N
MerR
Motif
Other DBs
NCBI-ProteinID:
UTO01416
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All DBs
Position
5111265..5112293
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AA seq
342 aa
AA seq
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MEHKKELSMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHRQIACVAGPEQMPLSHYRLQGYVQALRRNGITVESSYITRGDFTYEAGAQALTALM
AQPKPPTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDLKLAQYCDPPLTTVAQPR
FQIGQQAMLLLLEQLNGQTVASGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagagttatccatggcgaccatgaaagacgtcgccgaaatggcgggc
gtttcaacggctaccgtatcgcgtgcgctgatgaacccggaaaaggtgtcaacgccaacg
cgccagaaagtggaacaggccgtgctggccgtgggttattctcctcatgctctgtcacgc
aatatcaaacgcaacgaatcccgcaccatcctggtgatcgtgcccgacatctgcgatccg
tttttcgccgatgtgatccaggggatcgaacagaccgcggcccaacaaggttatctggtg
ctgatcggcgactgcgcgcagcaaaatcagcaagagcgcaccttcgtcaatctgatcatc
accaaacagatcgacggtatgctgctgctgggctccaacctgccgttcgacgccagcaag
gaagagcagcgcaacctgccgccgatggtgatggccaacgagtttgcccctgagctggaa
ctgccgacggtgcacatcgataacctgactgccgcctttgaagccgtgcattatttgcat
caattgggccaccggcagatcgcctgcgtcgccgggccggaacagatgccgctgagccat
tatcggctgcagggttacgttcaagcgctacgtcgtaatggcattaccgtcgaaagcagc
tatattacccggggtgattttacctacgaagccggcgcgcaagcgctgacggcgctgatg
gctcagccgaaaccgccgacggcggtgttctgccacagcgacgtcatggcgatcggcgtg
ctgtcccaggcgaagaaaatggggctgcgggtaccgcaggatctgtcgatcgtcggcttt
gacgacctcaagctggcgcagtattgcgatccgccgctgaccacggtggcgcagccgcgc
ttccagatcggccagcaggcgatgttgctgctgctggagcagttgaacggccaaacggtg
gccagcggctcccggctattggacagtgaattgattatcagaggcagcaccgctgccccg
aaacgctag
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