Serratia nematodiphila: NLX84_24965
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Entry
NLX84_24965 CDS
T08619
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
snem
Serratia nematodiphila
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snem03016
]
NLX84_24965 (mnmE)
Transfer RNA biogenesis [BR:
snem03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NLX84_24965 (mnmE)
Prokaryotic type
Methyltransferases
NLX84_24965 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
Ras
ABC_tran
GTP_EFTU
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UTO01539
LinkDB
All DBs
Position
complement(5252037..5253401)
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AA seq
454 aa
AA seq
DB search
MSTTDTIVAQATPPGRGGVGILRISGSKAKDVAQALLGKLPKPRYADYLPFRDAAGATLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRVLALPDVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAMNSLQGAFSTRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVMADLDNVRGEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWNEIEQADRVL
FMVDGTTTAATEPAEIWPEFMARLPGTLPITVVRNKADITGETLGLTEVNNHSLIRLSAR
TGEGVDVLRDHLKQSMGFTSNMEGGFLARRRHLQALELAAQHLVQGKEQLVSAYAGELLA
EELRQAQLALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccgataccatcgtagcccaagccaccccgccgggacgcggcggcgtcggc
attctgcgcatttccggaagcaaggccaaagacgtcgcccaggcgttgctcggcaagctg
ccgaagccgcgctacgctgactatctgccgttccgcgacgccgccggcgccaccctcgat
cagggcatcgcgctgtggtttccggggccaaactcctttaccggcgaagacgtgctggag
ctgcagggccacggcgggccggtgatcctcgatctgctgctcaagcgcgtgctggcgctg
cccgacgtgcgcatcgcccggcccggcgagttctccgaacgcgcgtttctcaacgacaaa
ctcgatctggcgcaggccgaagcaattgccgatctgatcgacgccagctccgagcaggcg
gcgcgttcggcgatgaactcgctgcagggcgcattttccactcgcatccatcagctcgtg
gaagcgctcactcacctgcgaatctacgtggaagcggcgatcgacttcccggacgaggaa
atcgacttcctgtccgacggtaaaatcgaggcgcagctcaacgacgtgatggcggatctg
gataacgtgcgtggtgaagcgcgccagggcagcctgctgcgcgaagggatgaaggtggtg
atcgccgggcgccccaacgccggtaaatccagcctgctcaatgcgttggccgggcgcgag
gcggcgatcgtcaccgatatcgccggcaccacccgcgacgtcttgcgcgaacatatccat
atcgacggcatgccgctgcacatcatcgacaccgccggcctgcgcgacgccagcgacgaa
gtggagcgcatcggcatcgaacgtgcctggaacgagatcgaacaagccgacagggtgctg
tttatggtggacggcaccaccaccgccgccaccgagccggcggagatctggccggagttt
atggcgcgcctgccgggcacgctgccgatcaccgtggtgcgcaacaaggccgacatcacc
ggtgaaacgctgggcctgacggaagtgaataaccactcacttattcgcctgtcggcccgc
actggcgaaggcgtcgatgtgctgcgcgatcatctgaaacagagcatgggcttcaccagc
aacatggaaggcggcttcctggcgcgccgtcgccacctgcaggcgctggaactggcggcg
cagcatctggtgcagggcaaagaacagttagtgagcgcttacgcgggcgagctgctggcc
gaggaactgcgccaggcgcagctggccttgagcgaaatcaccggcgaattcacctccgac
gacctgctgggccgcattttctccagcttctgtatcggtaaataa
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