Stieleria neptunia: Enr13x_12370
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Entry
Enr13x_12370 CDS
T09828
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
snep
Stieleria neptunia
Brite
KEGG Orthology (KO) [BR:
snep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snep03016
]
Enr13x_12370 (rnd)
Enzymes [BR:
snep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Enr13x_12370 (rnd)
Transfer RNA biogenesis [BR:
snep03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Enr13x_12370 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDV41399
UniProt:
A0A518HKV3
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All DBs
Position
1652723..1653901
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AA seq
392 aa
AA seq
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MEYESISAIDDLRQFCDELADAPIIAFDTEFVSEDRYRPQLCLIQVAAGDRLAIIDPLAM
HSTAPFWDLLVQPGRTVIAHAAREECRFCYQFTNQPIAGLFDTQLAAGFSGMEFPISLGN
LVNRLTGKTLAKGESRTNWRHRPLSRDQLNYALQDVTDLEAMYWMQREAIEKLNRHAWLE
EETEIRQQKVIQHETSENWRRVSGCAGMTPRQLEIIRHLWRWRDQRAATLDRPVRRVMRD
DLMVELAKRGSAEIKKIRNIRGMDWRGYSAHYDDISAAIQAALEVPDDQLPRRTRKSRGV
ISPMLSQFLSTSMACISRQNKLAPSIVGNADDVKEVLGFELDPKEGDKIPSLLTGWRGEI
VGKTFRKLLSGHAAIRVADVRKEQPLEFVELD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttggaatacgaatcgatcagtgcgatcgacgatcttcgtcaattctgtgatgaactggct
gatgcgccgatcattgccttcgacaccgagtttgtttccgaagaccgttatcgaccccag
ttgtgtttgattcaagtcgccgccggagatcgattggcgatcattgatcccttggcgatg
cacagcaccgccccgttctgggatctgttggtccaacccggccgcacggtgatcgcccac
gcggcgcgggaggagtgtcggttctgttaccagttcaccaatcagccgatcgccgggctg
ttcgatacgcaactggcagccggattcagcggcatggagttccccatatcgctcggcaat
ctggtcaatcggctgacgggcaaaacccttgccaagggagagtcacgcaccaattggcgg
catcgtccgctctcacgcgaccaactgaactatgcgttgcaagacgtgacggacctggaa
gcgatgtattggatgcagcgtgaggcgatcgaaaagctgaaccgccacgcttggttggaa
gaagaaaccgagatccgtcaacaaaaagtcattcaacacgaaacgagcgaaaactggcgg
cgcgtcagcggatgcgccgggatgacgccgcgacaactggagatcatccgccacctttgg
cgctggcgtgaccagcgcgccgcgacgctcgatcggccggtgcgacgcgtgatgcgtgac
gatctgatggtcgaactcgccaaacgcggatcggccgagatcaaaaagatccgcaacatc
cggggcatggattggcgcgggtatagcgcacactatgacgacatctcggccgcgatccag
gcggcgcttgaggttcccgacgaccaactgccacggcgaaccaggaaatcacgcggcgtc
atctccccgatgctcagccagttcctgtcgacctcgatggcctgcatcagtcgtcagaat
aagctcgccccgtcgatcgtcggcaacgccgacgacgtcaaggaagtgctcggttttgaa
ctggatcccaaagaaggcgacaagataccctcgttgttgaccggatggcgcggcgagatt
gttggaaagacctttcgaaagctactcagcggtcacgcggcgatccgtgtcgcggacgtt
cgcaaagaacagccgctggaattcgtcgagctggattga
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