Stieleria neptunia: Enr13x_69010
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Entry
Enr13x_69010 CDS
T09828
Symbol
ligT
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
snep
Stieleria neptunia
Brite
KEGG Orthology (KO) [BR:
snep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snep03016
]
Enr13x_69010 (ligT)
Enzymes [BR:
snep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Enr13x_69010 (ligT)
Transfer RNA biogenesis [BR:
snep03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Enr13x_69010 (ligT)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
PIF2
Motif
Other DBs
NCBI-ProteinID:
QDV46992
UniProt:
A0A518I1J7
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All DBs
Position
9401300..9401872
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AA seq
190 aa
AA seq
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MQTIRSFISIPVPPAVTSAAGKIMKRLKPLDDSFKWVPIDNFHLTLKFLGEVDNVEVPAV
CKAIRRVTDDIEPFELGFAGIGGFPNAEKPRVVFIGVDDPTGNLVQLVAGLEKQLADLGF
KPEPRDYTPHLTLGRTRSNSRRGGDALVDAMQDLADIGLGEMVVDEVHLMASFLDKTGPT
YQVMDTIELE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgatccgatccttcatctccattccggtcccccccgccgtcacctcggccgcc
ggaaagatcatgaaacgactcaaaccgctcgacgacagcttcaaatgggtgccgatcgac
aactttcatttaacgttgaagtttctcggcgaagtcgacaacgtcgaggtccccgcggtt
tgcaaagcgattcgccgcgtgaccgacgacatcgaacccttcgaattagggtttgccggg
atcggcggttttcccaacgccgagaaaccgcgtgtcgtctttatcggggtcgacgacccc
accggaaacctggtccaactggtcgccggcctggaaaagcaactcgccgatctgggtttc
aaacccgaaccacgcgactacaccccgcacctgaccctcggacgcacccgcagcaattcc
cggcggggcggcgatgcgctggtcgacgcgatgcaggatctggccgacatcggactgggc
gaaatggtggtcgacgaagtccacctgatggccagttttcttgacaagaccggaccgacc
tatcaagtcatggacacgatcgaattggaatag
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