Serratia nevei: OI978_00405
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Entry
OI978_00405 CDS
T09395
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snev03400
]
OI978_00405 (phrB)
Enzymes [BR:
snev01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OI978_00405 (phrB)
DNA repair and recombination proteins [BR:
snev03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OI978_00405 (phrB)
Prokaryotic type
OI978_00405 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1815
Motif
Other DBs
NCBI-ProteinID:
WIJ64504
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All DBs
Position
complement(73342..74772)
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALQAACSDPEARVLAVFIATPQQWRQHEMAPRQAALIHASLQ
AVQQALAHKGIALHCHSCADFAASIDWLSDYCEREQVDALFYNRQYELNERRRDARLEQR
LSGRVRCHGFDDSLLLPPGSVLTGGGEMYKVYTPFRNAFLQRLTESDVSCLPAPKIRAGG
ALPMPEAPVAFDYPMADIGDGYPAGEEAALQRLRAFCREQVQDYLRQRDLPALAGTSSLS
PYLAIGVLSPRQCFNRLRAECPQLLEDRESGAFAWLNELIWREFYRHLLVAYPDLCRHRP
FIAWTDKVRWCDDAAKLQAWQRGETGYPIVDAAMRQLNATGWMHNRLRMISASFLVKDLL
IDWRAGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTFIR
KWLPELADVPDNDIHHPHRWAEKQRCTLNYPLPIVDHKQARLETLAAFEAAKRGES
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttgcgtaacgatctgcgtatcaccgacaacaaagcgctg
caggcggcctgcagcgatcccgaagcccgggtgctggcggtgtttatcgccacgccgcag
cagtggcggcaacatgagatggcgccgcggcaggcggcgctgatccacgccagcctgcag
gcggtgcagcaggcgctggcgcacaagggcattgcgctgcattgccattcctgtgcggac
tttgccgcgtcgattgattggctgtcggactattgtgagcgggagcaggtggatgcgctg
ttttacaatcgccaatacgaactgaacgaacggcggcgagatgcgcggctggaacagcgg
ttgagtggccgggtgaggtgccacggtttcgatgacagcctgctgttgccgccgggcagc
gtgctcaccggcggcggcgagatgtacaaggtctatacgccgtttcgcaacgcctttctt
caacgcctgaccgagtccgacgtgagttgcctgccggcgccgaagatccgcgccggtggt
gcgttacccatgcctgaagcgccggtggcgttcgattatcccatggcagacatcggggat
ggctatcccgccggtgaggaggccgcgttgcagcggctgcgcgccttttgccgcgagcag
gtgcaggattacctccggcagcgcgatctgccggccctcgccggcaccagtagcctgtcg
ccctatctggcgatcggcgtgctgtcgccgcgccagtgcttcaatcgcctgcgcgccgaa
tgcccgcagctgctggaagatcgcgaaagcggtgccttcgcctggctcaacgagctgatt
tggcgcgagttctatcgccatctgctggtggcctatcccgatctgtgccgccatcggccg
tttattgcctggacggacaaggtgcgctggtgcgatgacgcggcgaagctgcaggcctgg
cagcggggcgagaccggctacccgatcgtcgatgccgccatgcgccagctcaacgccacc
ggctggatgcacaaccggctgcgcatgatcagcgccagttttctggtgaaggatctgctg
atcgactggcgcgccggggagcgctatttcatgtcgcaactgctggatggggatctggcg
gccaacaacggcggctggcagtgggcggcctccaccggcaccgacgccgcgccgtatttc
cgcatcttcaacccgacgactcagggtgaacgttttgatccacaaggcacttttatccgt
aaatggttgccggaactggcggatgtgcccgacaatgacatccatcatccccatcgctgg
gcggaaaagcagcgatgcacgctgaactacccgctgccgatcgtcgaccataagcaagcc
cggctggagacgctggcggcgttcgaggcggcaaaacggggagagtcttga
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