Serratia nevei: OI978_02610
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Entry
OI978_02610 CDS
T09395
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snev03016
]
OI978_02610 (truD)
Enzymes [BR:
snev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OI978_02610 (truD)
Transfer RNA biogenesis [BR:
snev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OI978_02610 (truD)
Prokaryotic type
OI978_02610 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WIJ64909
LinkDB
All DBs
Position
complement(518202..519248)
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AA seq
348 aa
AA seq
DB search
MDMANLTWLHGRPQSTGVLKANPEDFVVVEDLGFAPDGEGEHVLVNIRKNGCNTQFVADY
LARFAGIHARTVSYAGLKDRHAVTEQWFCLHMPGKDTPDFSRFTLEGCEVLSYARHLRKM
RIGNLKGNHFTLVLRQISDRQDVERRLQAIAVQGVPNYFGSQRFGRGGNNLVMARRWAND
EIRVKERSKRSFYLSASRSALFNQVASRRLADGLQRTVLEGDALQLRGRGSWFVAKADEL
ETLQQRLDAGELVVTAALPGDGEPGTAGDALAFEQECLAEQSELLTLLKRERVEPARRAL
LLQPQNMLWNWWDDVTVELRFWLPAGSFATSVVREIMQQDDSDADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcgaatctgacctggctgcatggccggccgcagagcaccggggtgttgaaa
gccaatccggaagatttcgtggtggtggaagacctgggctttgcgccggacggtgaaggc
gagcacgtcctggttaacatccgtaaaaacggctgcaatacccagttcgtggccgattac
ctggcgcgcttcgccggtattcacgcccgtaccgtcagctatgccggcttgaaggatcgc
cacgcggtgaccgagcagtggttctgcctgcatatgccgggtaaggacacgccggatttc
tcccggtttacgctggaaggctgcgaggtgctctcgtacgcccgccatctgcgtaaaatg
cgcatcggcaacctgaagggcaaccactttacgttggtgctgcgccagatttccgaccgg
caggacgtggaacgccgcctgcaggccatcgccgtgcagggcgtgccgaactacttcggc
agccagcgtttcggccgcggcggcaacaacctggtgatggcgcgccgctgggcgaatgac
gaaattcgcgtcaaagagcgcagcaagcgcagtttctacctgtccgccagccgcagcgcg
ttgtttaatcaggtcgcgagcaggcgtctggccgacggcctgcagcgcaccgtgctggaa
ggtgacgccctgcagctgaggggccgtggcagctggtttgtcgccaaagccgatgagctg
gagacgctgcaacagcgcttggatgccggcgagctggttgtcaccgcggcgttgccgggc
gacggcgagccgggtactgccggcgatgcgttggcatttgaacaagaatgcttggcggag
cagtcggaattgcttacgcttttaaagcgcgagcgtgtcgaacccgctcgtcgggccctg
ctgttgcagccgcaaaatatgctgtggaactggtgggatgacgttaccgtggaactgcgc
ttctggctgccggcaggcagcttcgccaccagcgtagttcgcgagatcatgcagcaggat
gacagtgatgcggatattgctgagtaa
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