Serratia nevei: OI978_04420
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Entry
OI978_04420 CDS
T09395
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
snev
Serratia nevei
Pathway
snev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI978_04420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snev03019
]
OI978_04420 (pnp)
03016 Transfer RNA biogenesis [BR:
snev03016
]
OI978_04420 (pnp)
Enzymes [BR:
snev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OI978_04420 (pnp)
Messenger RNA biogenesis [BR:
snev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OI978_04420 (pnp)
Transfer RNA biogenesis [BR:
snev03016
]
Prokaryotic type
tRNA degradation factors
OI978_04420 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
OB_PDCD11
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
DUF6226
UPF0181
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
WIJ65246
LinkDB
All DBs
Position
complement(919393..921510)
Genome browser
AA seq
705 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWDWQAPAVNE
ALHARVAELAEARLGDAYHITEKQERYAQVDAIKDSVVETLLAQDETLDASEIQDILGNV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEADNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAMAPEAGSPAPEAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcaccatcgaaacc
ggtatgatggctcgtcaggccaccgccgccgttatggtgagcatggatgacaccgccgta
ttcgttaccgtggttggccagaaaaaagccaagccgggccagagcttcttcccgctgacc
gttaactaccaagagcgtacctacgccgccggtcgtatcccgggcagcttcttccgtcgc
gaaggccgtccgagcgaaggcgagacgctgacttcccgtctgattgaccgcccgatccgc
ccactgttcccggacagcttcctgaacgaagttcaggtgatcgcgaccgtggtttccgtt
aacccgcaggtgaacccggacatcgttgcgatgatcggtgcttccgcagccctgagcctg
tccggtattccgttcaacggcccaatcggcgcagcgcgcgtgggttacatcaacgaccag
tacgtcctgaacccaacgactgacgaactgaaagaaagccgtctggatctggtggttgcc
ggtaccgcaggtgcggtgctgatggttgaatccgaagcggacgtgctgagcgaagaccag
atgctgggcgccgtggtgttcggccacgaccagcagcaagtggttatcgaaaacatcaac
gcgctggttgccgaagccggcaagccgaagtgggattggcaggcgcctgcggtcaacgaa
gcgctgcacgcgcgcgtggctgaactggccgaagctcgcctgggcgacgcttaccacatc
accgaaaaacaagagcgctacgctcaggttgacgcgatcaaagacagcgtcgttgaaacc
ctgctggcgcaggacgagactctggatgcctctgaaattcaagacatcctgggcaacgtc
gagaaaaacgtggtgcgcagccgcgtactgcgtggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggcctggatgtgcgcaccggcgtactgccgcgcacccacggttcc
gcgctgttcacccgtggcgaaactcaggcgctggttaccgcgaccctgggcaccgcgcgc
gacgcacagaacctggacgagctgatgggcgaaaagaccgacagcttcctgttccactac
aacttccctccgtactccgtgggcgaaaccggcatggtcggttcacctaagcgtcgtgaa
atcggtcacggtcgcctggcgaaacgcggcgtattggctatgatgcctaaaccagaagat
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttccatg
gcttccgtgtgcggtgcgtctctggcgctgatggacgccggtgtgccaatcaaggctgcc
gttgcgggtatcgcgatgggcctggtgaaagaagccgataactttgtggttctgtccgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagtggccggtagccgcgac
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacccgcgaaatcatgcag
gtggctctgaaccaggccaagggcgcacgtttgcacatcctgggcgtgatggaacaggct
atcagcaccccgcgcggcgatatctccgaattcgcaccgcgtattcatactatccgcatc
aacccggataaaatcaaagacgtgatcggtaagggcggttccgttatccgcgcactgacc
gaagagactggcactaccatcgaaatcgaagatgatggtacagttaaaatcgctgcgacc
gacggtgagaaagcgaaattcgctatccgtcgtatcgaagagatcacggcagagatcgaa
gtgggccgtatctaccagggtaaagtgacccgtatcgttgatttcggcgcgttcgtcgct
atcggcggtggtaaagaaggtctggtacacatttctcagatcgccgacaagcgcgtcgag
aaagtgaccgactatctgcagatgggtcaggaagtgccggttaaggtgctggaagttgac
cgtcagggccgcgtgcgtctgagcatcaaagaagcgatggcgccggaagcgggttcacct
gcgcctgaagcagaataa
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