Serratia nevei: OI978_04430
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Entry
OI978_04430 CDS
T09395
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snev03016
]
OI978_04430 (truB)
Enzymes [BR:
snev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OI978_04430 (truB)
Transfer RNA biogenesis [BR:
snev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OI978_04430 (truB)
Prokaryotic type
OI978_04430 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WIJ65248
LinkDB
All DBs
Position
complement(922161..923105)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDTFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIARMVTLEQLNALLAQAQEQDIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIAED
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggcgtgctgttgctggacaagccg
cagggtttgtcgtccaacgatgcgctgcaaaaagtaaaacgcctgtacaacgccaaccgg
gcgggccataccggcgcgctcgatccgttggcgaccggcatgctgcctatctgtctgggc
gaagcgaccaagttttcgcaatacctgctcgattccgacaagcgttatcgggtgatcgcc
aagctggggcagcgcaccgatacctccgacgccgacggccagatcgtgcaggagcgcccg
gtgaattttacccaggcgcagctcgacgcggcgctggacaccttccgcggcgatatccag
caggtgccgtcgatgtattcggcgctgaaataccagggcaagaagctctacgagtatgcg
cgccaggggattgaagtgccgcgcgaagcgcgcagcatcacggtgtacgagctgcagttt
atccgctgggaaggggatgagctggagctggagatccactgctcgaaaggcacctacatc
cgcaccatcaccgacgatctcggcgagctgctgggctgtggcgcgcacgtgatctatctg
cgccgcctgcaggtggcgacttatccgatcgcgcgcatggtgacgctggaacagctgaac
gctttgctggcgcaggcgcaggaacaagacatcgcacccggcgaactgctcgatccgctg
ctgatgccgatggacagcccggttgagaactatccggaagtgaatttgctgccggtggtg
gcgggctatgtcaagcaggggcaaccggtgcaagtggccggcgcgccggcttccggcatg
gtgcgtatcaccgagggtgaagagcggaaattcatcggcgttggcgacattgccgaggac
ggtcgcgtggcgccgcgccgcctggtggtcgagcatttcgactga
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