Serratia nevei: OI978_05295
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Entry
OI978_05295 CDS
T09395
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
snev
Serratia nevei
Pathway
snev00071
Fatty acid degradation
snev00280
Valine, leucine and isoleucine degradation
snev00310
Lysine degradation
snev00362
Benzoate degradation
snev00380
Tryptophan metabolism
snev00410
beta-Alanine metabolism
snev00640
Propanoate metabolism
snev00650
Butanoate metabolism
snev00907
Pinene, camphor and geraniol degradation
snev00930
Caprolactam degradation
snev01100
Metabolic pathways
snev01110
Biosynthesis of secondary metabolites
snev01120
Microbial metabolism in diverse environments
snev01200
Carbon metabolism
snev01212
Fatty acid metabolism
Module
snev_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
OI978_05295 (fadB)
00650 Butanoate metabolism
OI978_05295 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
OI978_05295 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
OI978_05295 (fadB)
00310 Lysine degradation
OI978_05295 (fadB)
00380 Tryptophan metabolism
OI978_05295 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
OI978_05295 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
OI978_05295 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
OI978_05295 (fadB)
00930 Caprolactam degradation
OI978_05295 (fadB)
Enzymes [BR:
snev01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
OI978_05295 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
OI978_05295 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
OI978_05295 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
OI978_05295 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WIJ65394
LinkDB
All DBs
Position
1105836..1108025
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNASGSVNKLDTRTVASLGEALTVLENQPELKGLLLRSS
KAAFIVGADITEFLSLFAAPAEKLQEWLVFANNVFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLAESALKMLQQAIDGKLDWRAVRQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKNVDAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDISDKSLTLGMSEAAKLL
NKQLERGKLDGLKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVENLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDDTIAKVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPDRMSKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDSKGKP
RKDHDEQTDVLLAEVSQPRQTISDEEIIARMMIPMINEVVRCLEEKIVASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVATPL
SDVATRQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgataacggcatcgccgagctg
gtgttcaacgcatcgggctcggtcaacaagctggacacccgcaccgtcgccagcctgggc
gaagcgctcaccgtgctggaaaaccaacctgagctgaaggggctgctgctgcgctcctcc
aaagccgcgtttatcgtcggcgccgatatcaccgaattcctttctctgttcgccgcaccg
gctgaaaagctgcaagagtggctggtgttcgccaacaacgtctttaaccggctggaagat
ttgccggtaccgaccatttcggccattaacggctatgcgctcggcggcggttgcgaatgc
attctggcgaccgatttccgcgtcgcctcaccggacgcgcgcatcggcctgccggaaacc
aaattgggcatcatgccgggcttcggcggttccgtccgcctgccacgcctgctgggtaac
gacagcgcgctggaaatcatcgccgccggcaaagacgtcagcgccaaagacgcgttgaaa
gtcggcctggtggatgcggtggtggcaccggaaaaactggccgaatcggcgctgaaaatg
ctgcaacaggcgatcgacggcaagctggactggcgcgccgtgcgtcaacctaagctggag
ccgctgaagctcagcccgattgaagccgcgatgagcttcaccaccgccaaaggcatggtg
ctgcagaccgccggaaaacattacccggcgccgatgaccgcagtgaaaaccattgaagcc
gccgccaagctgggccgcgatgaagcgctgaaactggaaaccgccagcttcgtgccgttg
gcgcgctccaacgaagcgcgcgcgctggtcggcatcttccttaacgaccagttcgtgaag
ggccaggcgaaaaagctggccaagaatgtggatgcgccgaaacaggcggcggtgctgggc
gctggcattatgggcggcggcatcgcctaccaatcggcgctgaaaggcgtgccggtgatc
atgaaagacatcagcgacaagtcgctgacgctgggcatgagcgaagcggccaagctgctc
aataagcagctggagcgcggcaagctggatggcctgaaaatggcgcaggtgctgtcgacc
attcagccgacgctggactacgccggcatcgagcgcgcacaggtgatcgttgaagcggta
gtcgagaatccgaaggtcaaagccgccgtgctgtcggaagtggaaaacctgatcggtgag
gacaccgttctggcgtcgaacacctcgaccattccgattaatcacctggcaaaatcgctg
aagcgcccgcaaaacttctgcggcatgcacttctttaacccggtacaccgcatgccgctg
gttgaaatcatccgcggcgaacagaccagcgatgacaccatcgccaaagtggtggcctac
gccagccgcatgggcaaaacgccgatcgtggtgaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccgtatttcgccggcttcagcctgctgctgcgcgacggcgccgacttc
cgtcagatcgataaagtgatggaaaaacagttcggctggccgatgggcccggcctacctg
ctcgacgtcgtgggcatcgacaccgcgcaccacgcgcaggcggtaatggccgccggcttc
ccggatcgcatgagcaaagactatcgcgacgccattgacgtgatgttcgacaaccagcgc
ttcggtcagaaaaatcagctgggcttctaccgctacagccaggacagcaaaggcaaaccg
cgcaaggaccacgacgagcagaccgatgtgctgctggccgaagtgagccaaccgcgccag
accatcagcgacgaagaaatcatcgcgcgcatgatgatcccgatgatcaacgaagtggtt
cgctgcctggaagagaagatcgtcgccagcccggcggaagccgatatggcgttggtctac
ggcatcggcttccctccgttccacggcggcgcgttccgctacctggatacgctcggcacc
gccaactacgttgagctggcccagcgttacgcacacctcggcgccctgtatcaggtgccg
gccggtctgcgcgccaaggccgaacgcaatgaaagctactacccggtggcgacaccgctg
tccgacgtcgctacccgccaaccggcatga
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