Serratia nevei: OI978_12255
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Entry
OI978_12255 CDS
T09395
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
snev
Serratia nevei
Pathway
snev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OI978_12255 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snev03019
]
OI978_12255 (rppH)
Messenger RNA biogenesis [BR:
snev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OI978_12255 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
WIJ66664
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All DBs
Position
2569608..2570135
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLLCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFAVTVMPMQEQAAPRQAPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcgtcagggg
caggtcttatgggcccgccgttacggtcagcactcctggcagtttccccaaggtgggatt
aaccctggcgaaactgcggagcaggcgatgtaccgtgagctgttcgaagaagtggggctg
agtaaaaaggatgtgcgcatcctggcttcgacccgcaactggttgcgctataaattgccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccaaaagcaaaaatggttt
ttgttgcagctactgtgcaatgacgctgatatcaatatgcagcgcagcagcacgccggag
ttcgacggttggcgctgggtgagcttctggtatccggtgcgccaggtggtgtcgttcaaa
cgcgacgtctaccgccgggtgatgaaagaattcgctgtgaccgtgatgccgatgcaagag
caggcggcgccgcggcaggcccccgcttatcgccgaaagagaggttaa
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