Serratia nevei: OI978_12305
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Entry
OI978_12305 CDS
T09395
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
snev
Serratia nevei
Pathway
snev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OI978_12305 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snev03400
]
OI978_12305 (recB)
Enzymes [BR:
snev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OI978_12305 (recB)
DNA repair and recombination proteins [BR:
snev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OI978_12305 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WIJ66674
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All DBs
Position
2582852..2586403
Genome browser
AA seq
1183 aa
AA seq
DB search
MTETAPQRLEPLTLPLFGERLIEASAGTGKTFTIGALYLRLLLGLGGEAAFPRPLTVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGVSANPLFSALMAEIDDLTDAASQLLAAER
QMDEAAIYTIHGFCQRMLTHNAFESGMLFEQTLVQDELPLRRQACADFWRRHCYPLPLGV
ARAVSQEWSGPEALLADLSGYLHGEAPALRRPPKEEETVLMRHEQIVARIDAIKAQWRAA
AGELEALIAQSGVDKRSYSSKHLPNWLNKVGEWSGQETQDYQLPKELDKFRQSVLLEKTK
KGEPPRHALFTAIDELFDEPLTLRDLIMARALSEIRTSIQQEKRQRAELGFDDLLSRLDG
ALQSGGGEQLAQAIRQRYPVAMIDEFQDTDPQQYRIFQKLYVGRPDCGLLLIGDPKQAIY
AFRGADIFTYMRARSEVSAHYTLETNWRSSPSMVASVNHLFSQVEKPFLFGQIPFIEVSA
AEKNQGLAFDLHGKPQPAMQFWLQQGEGAGVSDYQQLMARLCATQIRDWLSAGQQGQAWL
QGGKEPRPVQASDITVLVRSRNEAALVRDALSALSIPSVYLSNRDSVFDTPEAKDLLWLL
QAVLAPEQERTLRSAMATGLMGLDAPTLDGLSRDERAWDALVNEFDDYRTLWLRRGVLPM
LSEVMKARQLAENLLASAGGERRLTDVLHLGELLQEAAAQLDSEHALVRWLAQQIAQPNR
QSDNQQLRLESDRHLVQVITIHKSKGLEFDLVWLPFVGNFRQQQQALYHDRHSFQALLDL
DANEESQAWAEEERLAEDLRLLYVALTRSVYHCSIGIAPLFQGTRKKQGETDLHRSALGY
LVQGGQAGDAAYLQERLQQLAGGGIALSLVEPPDEAPWQPQAALAEALAAKNFTRRIQDF
WRVTSYTGLQQHGASLMQDLLPRLDVDAAGERGEESEPALTPHTFPRGATPGTFLHSLFE
TLDFTQPLDEQWLLAQLQQHGFAEHWQPILLAWMRVLLNTPLADSGVTLAALMPQHKQAE
LQFYLPINRLLQAKELDALVKRYDPLSARCPALDFHQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEDSSAYTRPAMEQAMAEHRYDLQYQLYTLALHRYLRHRLPDYDYRRHFGGVIY
LFLRGVDAAHPGNGIFTCLPEFELVEGMDRLFSGEAAATEEGS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaactgccccgcagaggctggagccgctgacgctgccgctgttcggcgaacgc
ctgatcgaggcgtcggcgggcaccggcaaaacctttaccatcggcgcgctgtatctgcgt
ctgctgctggggttgggcggtgaagcggcgtttcctcgcccgctgacggtagaagaaatc
ctggtggtgacctttaccgaggccgccaccgaggagctgcgcgggcgtatccgcgacaat
attcacggattacgcatcgcctgtgtacggggcgtcagcgccaacccgctgttttcggcg
ctaatggctgaaattgacgatttgaccgacgccgcttcgcagctgctggcggcggagcgg
cagatggacgaagcggcgatctacaccattcacggcttttgccaacgaatgctgacgcac
aacgccttcgagtccggcatgctgtttgaacaaacgctggtgcaggacgagctgccgctg
cggcggcaggcctgtgccgacttctggcgtcgccactgctatccgttgccgctgggcgtg
gcgcgtgcggtcagccaggagtggagcggcccggaagcgttgctggccgatctctccggt
tatctgcacggtgaagcgccggcgctgcgtcggccgccgaaggaggaagaaaccgtcctg
atgcgccacgagcagatcgtcgcacgcatcgacgccatcaaggcgcaatggcgggcggcg
gcgggcgagctggaggcgctgatcgcccagtcaggcgtcgataagcgcagttacagcagc
aagcacctgccgaactggctgaacaaggtcggcgaatggagcgggcaggagactcaggac
taccagctgccgaaggaactggataaatttcgccagtcggtgctgctggagaagaccaag
aaaggcgagccgccgcggcatgcgctgttcacggcgatagatgaactgttcgatgaaccc
ttgacgctgcgcgacctgatcatggcgcgcgcgctcagcgagatccgcacttccattcag
caggaaaagcgccagcgcgccgagctggggtttgacgacctgctcagccggctggacggc
gccctgcaaagcggcggcggcgaacagctggcgcaggcgatccgtcagcgctacccggtg
gcgatgatcgatgaattccaggataccgatccgcagcaataccgtattttccaaaagctt
tacgtcggccggcccgattgcggcttgctgctgatcggcgatcccaagcaggcgatttac
gcctttcgtggcgccgacatttttacctacatgcgggcgcgttcagaggtgagcgcccac
tatacgctggagactaactggcgctcgtcgccgtcgatggtcgccagcgttaatcacctg
ttttctcaggtagaaaagcctttcctgttcggccaaatcccctttatcgaggtcagcgcg
gcagaaaagaaccaagggttggcgtttgacctgcacggcaagccgcaaccggcgatgcag
ttctggctgcagcagggggaaggcgccggtgtaagtgattaccaacagttgatggcgcgc
ctgtgcgccacgcaaattcgtgactggctcagcgccgggcagcagggccaggcgtggctg
cagggcggcaaagagccaaggccggtacaagcttccgatatcacggtgctggtgcgcagc
cgcaatgaggctgcgttggtgcgcgatgcgctgagcgcgctgtccattccatcggtgtat
ctatccaaccgcgacagcgtgttcgacaccccggaggccaaagacctgctgtggttgttg
caggcggtgttggcgccggaacaggagcgcacgctgcgcagcgccatggccaccgggctg
atggggctggacgcgccgacgctggacggcctgagccgcgatgagcgcgcctgggacgcg
ttggttaatgaattcgacgattaccgcacgctctggctgcgccgcggcgtgttgccgatg
ctgagcgaggtgatgaaagcgcgccagctggcggagaacctgctggccagcgccggcggc
gagcgtcgcttgaccgacgtgctgcacctgggggagctgttgcaagaggcggcggcgcag
ctcgacagcgagcatgcgctggttcgctggttggcgcagcagattgcccagcctaatcgc
cagtccgacaatcaacagctgcggctggagagcgaccggcatctggtgcaggtgatcacc
atccacaagtctaaggggctggaattcgatctggtgtggctgccgttcgtcggcaatttc
cgccagcagcaacaggcgctgtatcacgatcgccatagcttccaggcattgctggatctc
gacgccaatgaagagagccaggcctgggcagaggaggagcggttggcggaagacctgcgt
ctgctgtacgtggcgctgacccgctcggtgtatcactgcagcatcggcatcgcgccgttg
ttccagggcacgcgcaagaaacagggcgagaccgatctgcaccgcagcgcattgggttat
ctggtgcagggggggcaggccggcgacgcggcgtatctgcaggagcggctgcagcaattg
gcgggcggcggcattgcgctgtcgctggtggaaccgccggacgaggcgccctggcagccc
caggcggcgctggccgaagcgctggcggcgaaaaactttacccggcggatccaggatttt
tggcgggtgaccagctataccggtttgcaacagcacggcgcgagtctgatgcaggatctg
ctgccgcgtctggatgttgacgccgcgggcgagcgcggggaagaaagtgagccagcgctc
acaccgcataccttcccgcgcggcgcaacgcccggcaccttcttgcacagcctgttcgaa
acattggatttcactcagccgttggacgaacagtggctgctggcacagctgcaacagcac
gggttcgccgaacattggcagccgattttgctggcgtggatgcgggtattgctcaacacg
ccgctcgccgacagcggtgtgacgctggcggcgctgatgccgcagcacaagcaggccgag
ctgcagttctatttgccgattaaccggttgttgcaggcgaaggagctcgatgccctggtg
aagcgttacgatccgctttccgcccgctgtccggcgctggattttcatcaggtgcagggc
atgctgaaaggctttatcgacctggtgttctgctggcagggcaaatactacctgctggac
tacaagtccaactggctgggggaagacagtagcgcctatacccggccggcgatggagcag
gcgatggcggagcatcgttacgatctgcaataccagctgtatacgctggcgctgcatcgt
tatctgcgtcatcggttgccggattacgattatcggcgccattttggcggggtgatttat
ctgttcctgcgcggcgtggatgcggcgcacccgggcaacggcattttcacctgtctcccc
gagtttgagttggtggaggggatggatcgcttgttcagcggcgaagctgcggcgacggag
gaaggatcatga
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integrated database retrieval system
