Serratia nevei: OI978_13275
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Entry
OI978_13275 CDS
T09395
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snev03009
]
OI978_13275 (srmB)
Enzymes [BR:
snev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OI978_13275 (srmB)
Ribosome biogenesis [BR:
snev03009
]
Prokaryotic type
rRNA helicases
OI978_13275 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIJ66853
LinkDB
All DBs
Position
complement(2764653..2765975)
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AA seq
440 aa
AA seq
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MTATTFSELELDERLVLALRDKGYDRPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDMVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGEAIREFAERILKEPVEVEADPSRRERKKILQWYYRADDVQHKTALLI
HLLKQSDVQKSVIFVRKRERVHELATWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLVATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPKTKVPNEKSNGKPSKKVLAKRAEDKAKNKEKAKVKVRHR
DAKNVGKRRQAKAKPAGDAE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaccactttttccgaactcgaactcgatgaacgcctggtactcgcactgcgc
gataaaggctacgatcgccccaccgctattcaagccgaagcgatcccgccggcgatggac
gggcgcgacgtcttaggttcggctccgaccggcaccggcaaaaccgccgccttcttgctg
cccgtgttgcagcacctgctggacttcccacgcaagaaatccggtccgccacgcgtactg
atccttaccccgacgcgtgagttagcgatgcaagtggccgatcaggcgcgtgagttggct
gctcatacctcgctggatatcgccaccatcaccggcggcgtcgcttacatgaaccacgcg
gaagtgttcagcgaaaaccaggacatggtggtcgccaccaccggccgtttgctgcaatac
attaaagaagagaacttcgactgccgcgcggtggaaaccctgatcctcgacgaagccgac
cgcatgctcgacatgggcttcgcgcaggacatcgaaaccatctccgccgaaacccgctgg
cgcaaccagacgctgctgttctccgccacgctggaaggcgaagcgatccgcgaattcgcc
gagcgcatcctgaaagagccggtggaagtggaagccgatccgtcgcgccgcgaacgcaaa
aagatcctgcagtggtactaccgcgctgatgacgtgcagcacaaaaccgcgctgctgatc
cacctgctgaagcagtcggacgtgcagaaatcggtgatcttcgtgcgcaaacgcgagcgc
gtgcacgagctggccacctggctgcgcgaagcgggcatcaacacctgctatctcgaaggc
gaaatggtgcaagccaaacgcaacgaagcggtcaaacgcatgatggatggccgggttaac
gtgctggtcgccaccgacgttgccgcacgcggtctggatatcctcgatatcacccacgtg
ttcaacttcgacatgccgcgcacggcggacacctacctacaccgcatcggccgtaccggc
cgtgccgggcgcaaaggcaccgccatttcgctggtggaagcgcacgaccatctgctgctg
ggcaaagtgggccgttacctgaacgagccgctgaaagcacgcgtgatcgacgaactgcgg
ccgaaaaccaaggtgccgaacgagaagagcaacggcaagccatcgaagaaagtgctggcc
aaacgcgcggaagacaaggcgaagaacaaagaaaaggccaaggtaaaagtgcgccatcgc
gacgccaaaaacgtcggcaaacgccgtcaggcgaaggccaaaccggccggcgacgcggaa
taa
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