Serratia nevei: OI978_16310
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Entry
OI978_16310 CDS
T09395
Name
(GenBank) autoinducer binding domain-containing protein
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
snev
Serratia nevei
Pathway
snev02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI978_16310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snev03000
]
OI978_16310
Transcription factors [BR:
snev03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
OI978_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_23
HTH_10
HTH_30
HTH_29
HTH_Crp_2
Terminase_5
Xre-like-HTH
HTH_38
HTH_24
HTH_Tnp_ISL3
HTH_5
Sigma70_ECF
HTH_17
HTH_11
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WIJ62441
LinkDB
All DBs
Position
3391222..3391950
Genome browser
AA seq
242 aa
AA seq
DB search
MSDEIAQRAFQTALAMDHERTLSAIQGRVRAFAAPFGFDRFVLFSASATAEAGIEHIYWV
EGDWFGDGEAVDALTYVRHCPVTRHMLRVSEPFFWTKTRVQQGERYRIVRTPRGAGLHGV
QIPVFGPAGLEGAVSLGGERIDASPPVRLALSLVGSAAFQAARRLFAPAAGEREGRLSAR
EREVLSWTAIGRRQADIAAMLGLSERTVENHLRRIRQRLGAATTAQAIGVAIRLGEIAPE
RR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgagatcgcgcagcgcgctttccagacggcgctggcgatggaccacgagcga
accctgtccgccattcaggggcgggttcgcgcctttgccgcgccgttcggcttcgatcgc
tttgtgctgttttccgcttccgccacggcggaggcggggatcgagcatatctattgggtc
gagggcgactggttcggcgacggcgaggccgtcgatgccctgacctacgtgcggcactgc
ccggtgacccggcacatgctgcgggtcagcgagccgtttttctggaccaagacccgggtg
cagcagggtgaacgctaccggattgtgcgcacgccgcgcggcgcgggcctgcacggcgtg
cagatcccggtgttcggcccggccggtttggagggcgccgtcagcctggggggcgagcgt
atcgacgcttcaccgccggtgcggctggcgctgtcgctggtgggctcggcggcctttcag
gcggcgcggcggctgttcgcaccggcggccggcgagagagagggccggctgtcggcacgc
gagcgagaggtgctgagctggaccgccatcggccggcggcaggcggatatcgccgcgatg
ctcggcctgtctgaacgcacggtggaaaaccacctgcgccgcattcgccaacgccttggt
gccgccaccaccgcacaggcgatcggcgtggcgatccgcctgggggagatcgcccccgag
cgccgttag
DBGET
integrated database retrieval system
