Serratia nevei: OI978_18420
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Entry
OI978_18420 CDS
T09395
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snev03009
]
OI978_18420 (dbpA)
Enzymes [BR:
snev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OI978_18420 (dbpA)
Ribosome biogenesis [BR:
snev03009
]
Prokaryotic type
rRNA helicases
OI978_18420 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WIJ62827
LinkDB
All DBs
Position
3842198..3843580
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AA seq
460 aa
AA seq
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MSTVSFSSLPLPAEQLANLNELGYAKMTPVQAAALPAILQGRDVRAKAKTGSGKTAAFGI
GLLNNIVVAQVATQALVLCPTRELADQVSKELRRLARFTQNVKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLLLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPAGIERISERVQRQPLSVEVDDDEAQTAIEQRFYETTRDQRPALLVSAIRYH
QPASCVVFCNTKRDCQTVLEALEARGISALALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGMSGLAISLCTPQEMARAHAIEDY
LQMTIAWAPVSELSGAANGSLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRKASARKALQQLQQGKIKGKSCKVRLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtttctttttcttccctgcctctgccagccgaacagttggccaacctcaac
gaactggggtacgccaaaatgacgccggtacaggccgccgcgttgcccgccatcctgcaa
gggcgagacgtgcgcgccaaggcgaaaaccggtagcggtaaaacggcggcgttcggcatt
ggtttgctgaataacatcgtcgttgctcaggttgccacgcaggcgctggtgctctgtccc
acccgcgagctggccgatcaggtgagcaaagaactgcgccgcctggcgcgcttcacgcag
aacgtcaaaatcctgacgctgtgcggcggccaaccgatggggccacagctcgattcgctg
gtgcacgcgccgcatatcgtggtgggaacgccgggccgcatccaggaacacctgcgcaag
aaaacgctgctgctggacgaactgaaggtgctggtgctggatgaggccgaccgtatgctg
gacatgggcttcgccgacgacatcgacgatgtgatcagttacacgccgccgcagcgtcag
acgctgctgttttccgctacctacccggcgggtatcgaacgcatcagcgagcgcgttcag
cgtcagccgctgagcgtcgaagtggacgatgacgaagcgcagaccgccatcgaacaacgt
ttctatgagaccacgcgcgatcagcgcccggcgctgctggtgtcggccattcgttatcat
caacccgcgtcctgcgtggtgttctgcaataccaaacgcgattgccaaacggtgcttgag
gccctggaggcccgcggcatcagcgcactggcgctgcatggcgatctggagcagcgcgac
cgcgaccaggtgttggtgcgtttcgccaaccgcagttgccgggtgttggtagcgaccgac
gtcgccgctcgtgggctggacatcaaagagctggagctggtggttaactacgaactggcg
ttcgatcctgaagtgcatgtgcaccgtatcggtcgtaccggccgcgccggcatgagcggg
ctggcgatcagcctgtgcacgccgcaggaaatggcgcgggcgcacgcgattgaagactac
ctgcagatgaccattgcctgggcgccggtgtccgagctgagcggggccgccaacggttcg
ctggaggcggagatggtgacgctgtgcatcgacggcggccgtaaggcgaagatccgccca
ggcgatatccttggcgcgctgaccggcgatgccgggctgacggcggcggaagtgggcaag
atcgacatgttcccggtgcatgcctacgtcgcgatccgtaaagccagcgcgcgcaaggcg
ctgcagcagctgcagcagggcaaaatcaaaggcaagagctgcaaggtgcggctgctgaaa
taa
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