Serratia nevei: OI978_18570
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Entry
OI978_18570 CDS
T09395
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
snev
Serratia nevei
Pathway
snev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OI978_18570 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snev03400
]
OI978_18570 (ruvB)
Enzymes [BR:
snev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OI978_18570 (ruvB)
DNA repair and recombination proteins [BR:
snev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OI978_18570 (ruvB)
RecFOR pathway proteins
OI978_18570 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_3
AAA_16
AAA_14
nSTAND3
Rad17
AAA_2
AAA_18
RNA_helicase
AAA_17
Bac_DnaA
NTPase_1
AAA_28
AAA_24
NB-ARC
TsaE
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIJ62856
LinkDB
All DBs
Position
3870277..3871281
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISAEPINEEEILDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVSRSAGCLGLELSDEGAHEVARRARGTPRIANRLLRRVRDFAEVRANG
VISGSVAAQALDMLNVDAEGFDYMDRKLLLAIIDKFTGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRLATQHAYRHFGLEREA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgcctgatttccgccgaaccgatcaacgaagaagagatcctcgat
cgcgccattcgtcccaagctgctgaccgaatacgtcggccagccgcacgtgcgcgagcag
atggagatcttcattcaggcggccaagcagcgcggcgacgcgctcgaccatttactgatc
tttggcccgccagggttggggaaaaccaccctggccaacatcgtggccaacgaaatgggc
gtgaatttgcgcaccacttccggcccggtgctggagaaggcgggcgatttggcggcgatg
ctgaccaacctcgaaccgcatgacgtcttgttcatcgacgaaatccaccgtttgtcaccg
gtggtggaagaagtgctgtatccggcgatggaagactaccagctggatatcatgatcggt
gaagggccggcggcgcgttcgattaagctcgatctgccgccgttcacgctggtgggcgct
accacccgcgccggctcgctgacctcgccgctgcgcgatcgcttcggcattgtccagcgg
ctggagttttatcaggtggcggatttgcagcacatcgtctcgcgcagcgccgggtgcctg
gggttggaactgtccgacgagggggcccatgaagtggcgcgccgggcacgggggacgcca
cgtattgccaaccgtctgttgcgccgggtgcgcgacttcgccgaagtgcgcgccaacggg
gtgatcagcggttcggtggcggcgcaggcgctcgatatgctcaacgtcgatgccgaaggc
ttcgactatatggatcgcaaactgctgctggcgattatcgacaagtttaccggcggcccg
gtcgggctggacaacctggcggcggcgataggcgaagagcgcgaaaccatcgaggacgtg
atcgagccgttcctgatccagcagggctttatccagcgcacgccgcgcggccgcttggcg
acgcagcatgcctaccggcacttcgggctcgagcgcgaagcataa
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