Serratia nevei: OI978_18900
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Entry
OI978_18900 CDS
T09395
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
snev
Serratia nevei
Pathway
snev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI978_18900 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snev03400
]
OI978_18900 (xthA)
Enzymes [BR:
snev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
OI978_18900 (xthA)
DNA repair and recombination proteins [BR:
snev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OI978_18900 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
WIJ62915
LinkDB
All DBs
Position
complement(3936916..3937722)
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK
GHYGVALLTKAEPLAVRRGFPTDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI
KFPAKTRFYQDLQNYLEQQLSAESPVLIMGDMNISPSDYDIGIGEDSRKRWLRTGKCSFL
PEEREWMNRLLNWGLVDTYRHANPGRNDEFSWFDYRSKGFDDNRGLRIDLLLASTPLASR
CIATGIDYQTRSMEKPSDHAPVWAEFTL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtctcttttaatatcaatggactgcgcgcgcgtccgcatcagctggcggca
attatcgaacagcaccagcccgacgtgatcggcctgcaagaaacgaaagttcacgacgac
atgttcccgctggaagaagtcagccagcacgggtatcacgtgttctatcacgggcaaaaa
ggccattacggcgtagcgctgctgaccaaagcggagcctctggccgtgcgccgcggtttc
ccgaccgatgaagaagatgcgcagcgtcgcatcatcatggccgatctggcgacgccgcag
ggcacactgacggtgatcaacggctacttcccgcaaggtgaaagccgcgaccacccgatc
aaattcccggctaaaacacgcttttatcaggatttgcaaaactacctggagcagcagctg
tcggcggaatccccggtgttgatcatgggtgacatgaacatcagcccgagcgattatgac
attggcatcggcgaagacagccgtaaacgctggctgcgcaccgggaagtgttccttcctg
ccggaagagcgcgaatggatgaaccgcctgctgaactggggcctggtagacacctatcgc
cacgccaacccggggcgcaacgacgaattctcgtggttcgactaccgttccaaagggttc
gacgacaaccgcggcctgcgtatcgatctgctgctggccagcaccccgctggcttcgcgc
tgcatcgccaccggcatcgattaccaaacccgcagcatggaaaaaccttccgaccatgcg
ccggtctgggcggaatttacgctgtaa
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