Serratia nevei: OI978_20060
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Entry
OI978_20060 CDS
T09395
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snev03000
]
OI978_20060
Transcription factors [BR:
snev03000
]
Prokaryotic type
Helix-turn-helix
Other families
OI978_20060
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_2
Mg_chelatase
HTH_30
Xre-like-HTH
AAA_5
HTH_7
HTH_28
AAA
HTH_29
HTH_23
HTH_1
HTH_22
HTH_psq
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WIJ63122
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Position
4161778..4163556
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AA seq
592 aa
AA seq
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MLPDDRLPTEGASLLTHPLAESWQRSRGYGLARADQHISFIKAGLLEERRSRNDWVPQRV
QPLIEQLGAQITRQPAIVVIADADGLVLETRGNTDFLHKASRFALAPGNPWGEAERGTNA
IGTALALGAFCEVRGDQHYLNQNAGLNCTAAPIYRPDGHIAGILDLSAPAQRPYRDAQRL
IMQAVRHIEHRWVRSAIADRHWTLRLHADAGSLGSAQELLLVFHDEVLVAANRLAMLEFQ
LLPAAFGSVEFAQLFPDLLRQPSGAPHQTLAGNQRHYYSLLEAPQRRVSALRSVSPPAER
HDEQHQKALRILNAGLSLCVTGETGCGKEHFSRRLFQESRWRNGNFVAINCAALPEPLIE
SELFGYAPGAFTGANPKGYIGKIREADGGVLFLDEIGDMPAGLQTRLLRVLQEKTVTPLG
SRSAYPVDFALVCATHHDLPRQVQAGAFREDLLYRIQEYSLRIPPLRERAQLEAFILQLW
RELGGERRDIRLLPEALAMLARYPWPGNVRQLLSTLKVLLALADDHAVLTLDDLPQSIAV
LAPRQDNADTGLEALQAAIGRAGGNLSRAAKALGVSRSTLYRKLGKQKAAAE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgacgaccgcttgcccactgagggcgccagtttgttgacccatccgctggcg
gaatcctggcagcgcagccggggctacggcctggcgcgcgccgatcagcacatctcgttc
atcaaagccgggttgctcgaagagcggcgcagccgcaacgactgggtgccgcaacgggtg
cagccgctgatcgagcagctgggcgcgcaaattacgcgccagcccgccattgtggtcatt
gccgacgccgacgggctggtgctggaaacccgcggcaataccgattttctgcataaggca
tcgcgctttgcgctggcgccgggcaacccgtggggggaagcggagcggggcaccaacgcc
atcggcaccgcgctggcgctgggcgcgttctgcgaagtgcgcggcgatcagcattacctc
aaccaaaatgccggattgaactgcaccgccgcgccgatctaccggccggatggccacatt
gccgggatattggatctttccgcccccgcgcagcggccgtatcgcgatgcacagcgcctg
atcatgcaggcggtgcgacatatcgaacaccgctgggtcagaagcgcgatcgccgatcgt
cactggacgctgcgcctgcacgccgacgccggtagcctgggcagtgcgcaggagctgctg
ctggtgtttcacgacgaagtgctggtcgccgccaatcggctggcgatgctggagttccag
cttttaccggccgcattcggctcggttgagttcgcccagctgttccccgatctgctgcga
cagccttccggcgcaccgcaccagacgctggccggcaatcaacggcattattattccctg
ctcgaggcgccgcagcgccgcgtcagcgccctgcgttcggtttcgccgccggcggaaagg
catgacgaacagcatcagaaggcgctgcgcattctcaatgccggtctttccctgtgcgtg
accggcgaaaccggctgcggcaaggagcacttcagccgacgcctgtttcaagagagccgt
tggcgcaacggcaacttcgtggcgatcaactgcgcggcgctgcctgagccgctgatcgag
tccgaactgttcggctatgccccgggggcgtttaccggcgccaacccgaaaggctatatc
ggcaagatccgcgaggcggacggcggcgtgctgttcctcgatgaaatcggcgacatgccg
gcgggcctgcagacgcggctgctgcgggtgttgcaggaaaaaacggtcacgccgctcggc
agccgcagcgcttatccggtcgatttcgcgctggtctgcgccacgcaccacgatctgcct
cggcaggtacaggcgggggcgtttcgtgaggatttgctgtaccgcatacaggaatacagc
ctgcgcattccgccgctcagagagcgggcgcagctggaagccttcattctgcagctgtgg
cgagagctgggcggcgagcggcgcgacattcgcctgctgccggaggcgctggcgatgctg
gcgcgctacccttggcccggcaacgtgcggcagctgttgagtacgctcaaggtgttgctg
gcgctggcggacgatcatgcggtgctcaccctggacgatctgccgcagtccatcgcggtg
ctggcgccgcgccaggataacgccgataccggcctggaggcgctgcaggcggcgatcggc
agggcgggcggtaatctcagccgggcggcgaaggcgctcggcgtttcgcgcagcacgctg
taccgcaagctgggaaagcagaaagcggcggcggaatga
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