Serratia nevei: OI978_21800
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Entry
OI978_21800 CDS
T09395
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snev03016
]
OI978_21800
Enzymes [BR:
snev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OI978_21800
Transfer RNA biogenesis [BR:
snev03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OI978_21800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
WIJ63444
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All DBs
Position
4506109..4508043
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRI
IATLHTEKEREIAEPETLVEPFLSRFVGRVQKRDDRLSIVPDHPLLKDAIPCRPVRELTH
NFQAGDWAVAEMRRHPLKGDRSFNADLTHFITEGEDHFAPWWVTLARHNLEKEAPEMQAL
SEPAAALVREDLTALEFVTIDSASTEDMDDALYVTDNGDGSLQLTIAIADPTAYVEQGSK
LDDIARVRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRQVLACRVTIAADGALGEDIQF
FAAEIESKAKLVYDEVSDWLEGIAGWQPPSDAIAQQITLLKRVCDARNAWRHRHALVFKD
RPDYRFVLGEKGDVLEIVTEQRRSANRIVEECMIAANVCAAVVLRDRLGFGVYNVHTGFD
PALVEQAVTVLQANGVEAEAEKLLTLDGFCELRRHLDAQPTQFLDSRIRRFQTFAEISTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIINQQPAEKPQDDVTVQLAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFNAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MQCSQETGTVQIKGEVVYRQSDTLQVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagcttaaacagcaacttcactctcagaccccg
cgcgttgaaggcgtagtgaaagggactgagaaaggctttggctttcttgaagtagacggt
caaaaaagttacttcattccgccgccgtacatgaagaaagtcatgcacggggatcgcatt
atcgccaccctgcacaccgagaaagagcgcgaaatcgccgagccggaaaccctggtcgag
ccgttcctgtcgcgctttgtcggccgcgtgcaaaagcgcgacgaccgtctgtccatcgtg
cccgatcatccgttgctgaaagatgcgattccgtgccgcccggtgcgtgaattgacccac
aacttccaggccggcgactgggcggtggcggaaatgcgccgtcacccgctgaaaggcgat
cgcagcttcaacgccgatctgacccactttatcaccgaaggtgaagaccatttcgccccg
tggtgggtgacgctggcgcgtcacaacctggagaaagaagcgccggaaatgcaggctctc
agcgagccggccgctgcgctggtgcgtgaagacctgaccgcgctcgaattcgtcaccatc
gacagcgccagcaccgaagacatggacgatgcgttgtatgtgaccgacaacggcgacggt
tcgctgcagttgaccatcgccatcgccgatccgaccgcctacgtcgagcaaggcagcaag
ctggacgatatcgcccgcgtgcgcgccttcaccaactacctgccgggcttcaacatcccg
atgctgccgcgcgatctgtcggacaacctgtgctcgctgcgccctaacgagcgccgccag
gtgctggcttgccgcgtaaccatcgccgccgacggcgcgctgggcgaggatattcagttc
ttcgccgccgagatcgaatccaaagccaagctggtatacgacgaagtctccgactggctg
gaaggcattgccggctggcagccgccgagcgatgccatcgcgcaacaaatcaccctgctg
aagcgcgtttgcgacgcgcgcaacgcctggcgccaccggcatgcgctggtgttcaaagac
cgcccggactaccgcttcgtgctgggtgaaaaaggcgacgtactcgagatcgttaccgag
cagcgccgcagcgccaaccgcatcgttgaagagtgcatgatcgccgccaacgtctgcgcc
gccgtcgtgctgcgcgatcgcctgggcttcggcgtgtacaacgtgcacaccggtttcgat
cctgctctcgtcgagcaagcggtcaccgtattgcaggccaacggtgtggaagccgaagcc
gagaagctgctgaccctcgacggtttctgcgaactgcgccgccacctggatgcgcagccg
acccagttcctcgacagccgcatccgccgcttccagaccttcgccgagatcagcaccacg
ccggggccacacttcggtctgggtctggaagcttacgccacctggacatcgccgatccgt
aaatacggcgatatggtcaaccatcgcttgctgaaggcgatcatcaaccagcagccggca
gaaaagccgcaggatgacgtcacggtgcagctggcggaacgccgccgcctgaaccgcatg
gcggagcgcgacgtcggcgactggctgtacgcccgcttcctgcaggacaaggccggtacc
gatacccgcttcaacgccgagatcatcgacgtgacccgcggcggcctgcgcgtgcgcctg
ctggacaacggcgccgttgccttcatcccggcaccgtttattcacgcggtgcgcgacgag
atgcagtgcagccaggaaaccggcaccgtgcagatcaagggtgaagtggtttaccgccag
agcgacaccttgcaggtcaccatcgccgaagtgcgcatggaaacccgcagcgtgatcgcc
cgtccggcggcctga
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