Serratia nevei: OI978_24900
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Entry
OI978_24900 CDS
T09395
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
snev
Serratia nevei
Pathway
snev00541
Biosynthesis of various nucleotide sugars
snev01100
Metabolic pathways
snev01250
Biosynthesis of nucleotide sugars
Module
snev_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OI978_24900 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
snev01005
]
OI978_24900 (kdsB)
Enzymes [BR:
snev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
OI978_24900 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
snev01005
]
Lipid A
OI978_24900 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DacZ_P
DUF2064
Motif
Other DBs
NCBI-ProteinID:
WIJ63996
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Position
complement(5114267..5115016)
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AA seq
249 aa
AA seq
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MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHPEVAKAVEA
AGGEVCMTSPDHHSGTERLAEVIAHYGFADDQIIVNVQGDEPLIPPVIVRQVAENLAGSQ
AGMATLAVPIESVEEAFNPNAVKVVMDAQGYALYFSRATIPWDRERFAASKESIGDSLLR
HIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL
QRVRDSIQP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatcgctattattcccgcccgctacgcctcgacccgtttgccgggtaaaccg
ctggccgatattcacggcaagccgatggtggtacacgtgatggagcgcgcccgtgagtcc
ggcgccagccgcgtcatcgtggcgaccgatcatcctgaagtcgccaaagcggtggaagcc
gccggcggcgaagtgtgcatgaccagcccggatcaccattccggcaccgagcggctggcg
gaagtgatcgcgcactacggctttgccgacgaccagatcatcgttaacgtgcagggcgac
gaaccgctgatcccaccggtgatcgtgcgtcaggtggcggagaacctggcgggcagccag
gccggcatggcgacgctggcggtgccgatcgagagtgtcgaagaggctttcaaccccaac
gcggtgaaggtcgtgatggacgcgcagggctacgcgctctatttttcacgcgccaccatt
ccgtgggaccgtgagcgtttcgccgcgtcgaaagagagcatcggcgacagcctgctgcgt
catatcggcatctacgcgtaccgcgccggcttcgtgcgtcgctacgtcagctgggcgccg
agccagctggaacagatcgagctgttggaacagctgcgcgtgctgtggtacggtgaaaaa
atccacgtggcggtcgcgaaagcgatcccgagcgtgggggtcgatacgccggaagatctc
cagcgcgtgcgcgacagcatccaaccctga
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