Serratia nevei: OI978_26525
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Entry
OI978_26525 CDS
T09395
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
snev
Serratia nevei
Brite
KEGG Orthology (KO) [BR:
snev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snev03000
]
OI978_26525 (prpR)
Transcription factors [BR:
snev03000
]
Prokaryotic type
Helix-turn-helix
Other families
OI978_26525 (prpR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_3
HTH_30
AAA_16
HTH_23
AAA
HTH_psq
AAA_2
Xre-like-HTH
HTH_Tnp_ISL3
HTH_1
HTH_24
HTH_AsnC-type
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WIJ64297
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Position
5458304..5459905
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AA seq
533 aa
AA seq
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MSDHVTPPRTPDKPVIWTVSITRLFDLFRDISLEFDHLATIIPIRLGFEEAVQHIRARLA
TEPCDAIIAAGSNGAYLKSRLSVPVILVKPGGFDLLQALSKARRTADRIGVITYKTPLPA
LMEFQQTFDLPLEQRSYVTEEDARGQIAELKATGIQAVVGAGLISDLAEEAGLTAIFLYS
AATLRAAFSDALDVTRLMLGGGKRGGDYAARNTLQPRYGLGDLQGESPQMEQTRRTIMLY
ARSPAAVLIEGETGTGKELAAQALHREYFSRRGAPARGATPPFVAINCGAIAESLLEAEL
FGYEEGAFTGSRRGGRRGLLETANGGTLFLDEIGEMPLHLQTRLLRALEEKAVTRVGGQQ
PVAVDFRVISATHNHLEQAIQRGDFRADLFYRLSALRLQLPPLRARGDDIAMLAEHFLKR
SLAALDVPLTEPLRAALAGCYAALNHYAWPGNLRELRNMMERVALMLSTGAAPSGETLRW
LLPELAAGTPPGTPPAPVSAHEALARCGGDHAAAARLLGISRTTLWRRLKHPA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacgtcacgccgccccgcacgccggacaaaccggtgatctggaccgtctcc
atcacccgcctgttcgatctgttccgggacatcagcctcgaattcgaccatctggcaacc
atcatcccgatccgcctcggctttgaggaggcggtgcagcacatccgcgcccgcctggcg
accgagccttgcgacgccatcatcgccgccggctccaacggcgcctacctgaaaagccgc
ctgtcggtgccggtcatcctggtcaagcccggcggtttcgatctgctgcaggcactgagc
aaggcgcgcagaaccgccgatcggatcggcgtcatcacctataaaacccctctgcccgcg
ctgatggagttccagcaaaccttcgatctgccgctggagcagcgcagctacgtcaccgaa
gaggatgcgcgcggccagatcgccgagctgaaagccaccggcattcaggccgtggtcggc
gccggcctcatcagcgatctggcggaagaggccgggctcaccgccatttttctctattcc
gccgccaccctgcgcgccgccttcagcgatgcgctggacgtgacgcgcctgatgctgggc
ggcggcaaacgcggcggcgattacgccgcgcgcaataccctgcagccgcgctatgggctg
ggcgatttgcagggcgagtccccgcagatggagcaaacgcggcgcaccatcatgctgtac
gcccgctcgccggcggcggtattaattgaaggagaaaccggcaccggcaaggagctggcg
gcgcaggcgctccaccgggaatacttttcccggcgcggcgcaccggccagaggcgcgacg
ccgccgttcgtcgccatcaactgcggcgccatcgccgaatcgttgctggaggcggagctg
ttcggctatgaggaaggcgcctttaccggctcacggcgcggcggccgacgcgggctgctg
gaaaccgccaacggtggcaccctgtttctggatgagatcggcgaaatgccgctgcacctg
caaacccggctgctgcgcgcgctggaagagaaggccgttacccgggtcggcgggcagcag
ccggtggcggtcgactttcgcgtcatcagcgccacccacaaccacctggagcaggcgatt
caacggggcgactttcgcgccgatctgttctaccgcctgagcgccctgcggctgcagctg
ccgccgctgcgggcgcgcggcgacgatatcgcgatgctggcggaacactttctgaaacgg
tcactggcggcgctcgacgtgccgctgacggagccgctgcgcgccgccctggccggctgt
tacgccgcgctgaatcattacgcctggcccggcaacctgcgcgaactgcgcaacatgatg
gagcgggtggcactgatgctgagcaccggcgccgcaccgagcggcgagacgctgcggtgg
ctgctgccggagctggcggcgggcacgccgcccgggacgccgccagcgcccgtctccgcc
cacgaagcgctggcgcgatgtgggggcgaccacgccgccgccgcccggttgctcgggatc
agccgcaccaccttatggcgccggttgaaacacccggcctga
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