Streptomyces nojiriensis: JYK04_00182
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Entry
JYK04_00182 CDS
T07326
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
snf
Streptomyces nojiriensis
Brite
KEGG Orthology (KO) [BR:
snf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snf03009
]
JYK04_00182
Ribosome biogenesis [BR:
snf03009
]
Prokaryotic type
ribosomal protein modification factors
JYK04_00182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QTI42425
LinkDB
All DBs
Position
complement(180224..182161)
Genome browser
AA seq
645 aa
AA seq
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MTRPATAPAPAPAPAPAAGPGPVPVLDATAALAATTGRAAVLLTRWTLGLAGELSRHALH
RPLALVPVRYDGPLAVIGPVLRPGGPACLVCTEYQRLATAGGRVPWQTPKLTLAGVPSPA
LTPAVEALVHDLLDPDPDPDRDPDAAVVHIVHQGRGTWSTHHVRPVGGCDVCHPLPSDTQ
TPLAPLPRGPRPLPDPAVLRDPNPRTTGAALRAALHDERFGPVRLLRRSEDSAFSLTSAL
VTDGRTVDDGGHGRARTFPDSERIALFEAVERYAGMRPTGRRTDLLASFAELGPDRALDP
ARLGLPDPAHHGHPASPTVPYTPDLPLHWVHGWSLTHRKPTAVPEHVAYWDVPGPDRPRV
VYESSNGCGLGNSPEEAALYGLFEVAERDAFLMAWYAATPLRRIHPPADDTDTLLLADRA
AAAGYRLLLLDATNDFAVPAVLAVCRYEGGHPDAPRMFLAAGAHHDPRAAIRSAVAEVVT
NVLEAPHRSSATGGPRDPGRLRPMLEHPELVQTLDDHVGLSTLPEAAPRLEFLFADTPAT
TVEAAWPGAPAPVPDLSGLLTHTVGRLARAGLEVITVDQSEPGLRDRFGLHCVKVVVPGA
LPMTFGHVNRRTLGLSRLLDVPHRLGRTSRPLRHGELPLHPHPFP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccccgccaccgcacccgcacccgcacccgcacccgcacccgcggccggtccg
ggccccgtccccgtactggacgccaccgcagccctcgccgccaccaccggccgggccgcg
gtcttgctgacccgctggacgctcggcctcgccggggaactgagccgccacgccctgcac
cggcccctggccctggtcccggtgcgctacgacgggccgctggcggtgatcggaccggtg
ctccggccgggcggcccggcctgcctcgtctgcaccgagtaccagcgcctggcgaccgcg
ggcggccgggtcccctggcagaccccgaagctgaccctggccggagtaccctcacccgcc
ctgaccccggccgtggaagccctcgtccacgacctcctcgaccccgaccccgacccggac
agggacccggacgcggccgtcgtccacatcgtccaccagggccgcggcacctggtccacc
caccacgtccgccccgtcggcggctgcgacgtgtgccacccgctgccctccgacacacag
acaccgctggcccccctgccccgcggaccccgcccgctgcccgacccggccgtcctgcgc
gaccccaacccccgtacgaccggcgccgcactgcgcgccgccctccacgacgaacggttc
ggccccgtgcggctgctgcgccgctccgaggactcggcgttcagcctcaccagcgcgctc
gtcaccgacggcaggaccgtcgacgacggcggccacggccgggcccgcaccttccccgac
agcgaacgcatcgccctcttcgaagccgtcgaacggtacgcgggcatgcgccccaccggc
cgccgcaccgacctgctggcctccttcgccgaactgggcccggaccgcgccctggacccc
gcacgcctcggcctgcccgaccccgcccaccacggccaccccgcctcacccaccgtcccc
tacaccccggacctgccgctccactgggtacacggctggtccctcacccaccgcaaaccg
accgccgtccccgaacacgtcgcctactgggacgtgccgggaccggaccggccgcgcgtc
gtctacgagtcctccaacggctgcggcctcggcaacagccccgaagaagccgccctgtac
gggctgttcgaggtcgccgaacgcgacgccttcctcatggcctggtacgccgccaccccg
ctgcgccgcatccacccgcccgccgacgacaccgacaccctgctgctcgcggaccgggcg
gcggccgccggctaccggctcctgctcctggacgccaccaacgacttcgccgtcccggcc
gtcctggccgtctgccgctacgagggcggccaccccgacgcaccgcggatgttcctcgcg
gccggcgcccaccacgatccgcgcgccgccatccgctccgccgtcgccgaggtcgtcacc
aacgtgctggaggcaccgcaccgctcctccgccacgggagggccgcgcgaccccggacgg
ctgcggcccatgctggagcaccccgaactcgtgcagaccctggacgaccacgtcgggctg
agcaccctgcccgaggccgccccgcgcctggagttcctcttcgccgacaccccggccacg
acggtcgaggcggcctggcccggcgcccccgccccggtgcccgacctctccggcctcctg
acgcacaccgtcggccggctggcccgggccggactggaagtgatcaccgtcgaccagagc
gagccgggactgcgcgaccggttcggcctgcactgcgtgaaggtcgtcgtccccggcgcc
ctcccgatgaccttcgggcacgtcaaccggcgcaccctcggcctgtcccggctgctggac
gtgccccaccgcctgggccgcacgagccggccgctgcgccacggcgaactgcccctgcac
ccgcaccccttcccctga
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